Pairwise Alignments

Query, 399 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 420 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 106/412 (25%), Positives = 178/412 (43%), Gaps = 39/412 (9%)

Query: 2   GVVKRRLAIWGSLLALLAAGIAYALRPQPIQVDLAVAEIGLLRVTLDEEGETRVRDVYTL 61
           G+ + +  + G  L L+AAG+  A      +V  A+ + G L  T+   G         +
Sbjct: 22  GLWRHKWPVLGIALVLIAAGLGLARLLLGPEVVAALVQRGNLVQTVVASGHIETPYRVEI 81

Query: 62  HAPLRGQLQRITAEVGDVVKAGETQLAQIEPAPPAFLDVRTE---AELQAAVEAARAAHN 118
            + + G ++ +  + G+ V  G+ QL  IE +      V+ E   A+ QA V   R    
Sbjct: 82  ASQITGTVKDVLVKEGEQVHQGQ-QLVAIEASELQASVVQAEGAVAQAQARVRQLRELTK 140

Query: 119 LAAAE-LNKAKADLTFAEGERARARQLIERRTISQRTLEDAERSYHVAQANLATAEAAL- 176
            AA E L +A+A+L  A+    RA +L      ++ TL+DA ++  VA+  + TAE  + 
Sbjct: 141 PAADEALKQAQANLLNAQAAYERASKLAASGYGTKATLDDATKNLDVARTQVRTAELQVF 200

Query: 177 ---------KVREHELHQARSRLLSRQEIRSLREDCECMPVTAPVSGVVLQVMRRSEGVV 227
                     + E +L QA + L + Q             + AP  GV++        VV
Sbjct: 201 TTSPGGSDFVMAETQLGQALANLNTAQARLGYAT------IVAPRDGVLITRNVERGTVV 254

Query: 228 EAGTPLLDIGDPTDLEIVVNFLSEDAVRIRPGQRAIITDWGGED--LNAVVRRIEPFGQT 285
           + G  LL +    D++IVV    ++  ++  GQ A+ +     D   +A +  I P    
Sbjct: 255 QPGKALLVLAPAGDIQIVVQIDEKNLGQLALGQHAMASADAYPDKRFDATLSYINP---- 310

Query: 286 QVSALGIEEQRVDVILDFADPTESWRSLGHGYRVDVQVILFE-GEVLKLPLGALFRQGEE 344
              ++ I    V++ L   DP +  R       V V +      +V+ +P  A+      
Sbjct: 311 ---SVDINRASVEIKLKVDDPPDYLRQ---DMTVSVDIATARRDDVVIVPARAVNDAAAA 364

Query: 345 WAVFVAAEGRARLRPVAVSQRNSLAVEIREGLVPGERVI-----LYPSDRIK 391
             V  A+ GRA  +PV +  R     E+ +GLVPG+RVI     + P  RI+
Sbjct: 365 PYVLKASGGRAVRQPVKLGLRGVGFYEVIDGLVPGDRVIPLATGVKPDQRIR 416