Pairwise Alignments

Query, 276 a.a., TRm1b transposase from Sinorhizobium meliloti 1021

Subject, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 19/268 (7%)

Query: 6   ETLGVARSNIAARAAGSPSRARGRPP-LPDRELVEDIKAVIADMPTYGYRRVHAILRRNA 64
           +T G  +    A A   P   R R   L D EL   +K + ++   +GYRR+H +L+R  
Sbjct: 6   KTKGYNQRRACALAGIDPRVYRRRSKRLADTELRVRMKELASERRRFGYRRLHMLLKREG 65

Query: 65  RKLGRSWPNAKRVYRVMKLHNLLLVRHTG---AVDNRLHEGQVAVERSNIRWCSDGFEIG 121
            ++     N K++YR+ +   L + +  G   AV  R        +  N RW  D     
Sbjct: 66  WEV-----NWKKLYRLYRDEGLTVRKRGGRKRAVGTRTP--MAIPQGPNQRWSLDFMSDA 118

Query: 122 CDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVENRFGRINMLSEPIEWL 181
            ++  + RV   +D   RE +A V  T    ++  ++L   A         +   P   +
Sbjct: 119 LEDGRRFRVLNVIDDFSRECLAAVVDTSISGARVARELDRIA--------ELRGYPCLVV 170

Query: 182 TDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTPDAETV 241
           +DNG+   +        D  ++        P  NG+ E+F    + + +  +  P     
Sbjct: 171 SDNGTELTSNAMLKWQEDRKVDWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHA 230

Query: 242 MAQLPFWFEHYNNLHPHSALGYQSPREF 269
              +  W + YN+  PHS+L   +PRE+
Sbjct: 231 CRMIAAWRDDYNHHRPHSSLDGLTPREY 258