Pairwise Alignments

Query, 142 a.a., copper protein from Sinorhizobium meliloti 1021

Subject, 581 a.a., CopA family copper resistance protein (RefSeq) from Shewanella loihica PV-4

 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 27  FTINGKSYPATDTIRMKVGRTLKVRFVGSHTAAIHPMHIHGGPFEVAAVDGVTLRQSARS 86
           ++ +G  +  +  + +K    +++  + + T   HPMH+HG   ++    G       R 
Sbjct: 482 WSFDGLEFGKSTPVALKHNERVRI-ILQNDTMMTHPMHLHGMWSDLEDAQG-----QLRV 535

Query: 87  LADTVNVGPGQRFDVLWKAQRPGKWLIHCHISHH 120
              T+ V P QR   L   Q  G+W  HCH+  H
Sbjct: 536 RRHTIPVQPAQRISFLATPQEVGRWAWHCHLLFH 569



 Score = 30.0 bits (66), Expect = 6e-05
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 27  FTINGKSYPATDTIRMKVGRTLKVRFVGSHTAAIHPMHIHGGPFEVAAVDGVTLRQSARS 86
           +  NG+      T   K G T+++RFV   +     + I      V   DG  +   +  
Sbjct: 221 YLFNGQPPNGNWTGIFKPGETVRLRFVNGASNTFFDVRIPNLTMTVIQADGQNIEPVS-- 278

Query: 87  LADTVNVGPGQRFDVL 102
             D    GPG+ +DVL
Sbjct: 279 -VDEFRFGPGETYDVL 293



 Score = 23.9 bits (50), Expect = 0.004
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 15/90 (16%)

Query: 29  INGKSYPATDTIRMKVGRTLKVRFVGSHTAAIHPMHIHGG--PFEVAAVDGVTLRQSARS 86
           ING S PA  T+  + G  + +R V +  +    +H HG   P+++  V G++       
Sbjct: 41  ING-SIPAP-TLIWREGDIITLR-VTNRLSVPTSVHWHGIILPYQMDGVPGLSYS----- 92

Query: 87  LADTVNVGPGQRFDVLWKAQRPGKWLIHCH 116
                 + PG+ F   ++ Q+ G +  H H
Sbjct: 93  -----GIAPGKTFTYRFRVQQSGTYWYHSH 117