Pairwise Alignments

Query, 189 a.a., ISRm25b transposase from Sinorhizobium meliloti 1021

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 1/158 (0%)

Query: 3   GISTRSVDDLVKAMGMSGISKSQVSRLCEEIDGKVKAFLDRPIEGDWPYLWIDATYLKVR 62
           G+S R ++  V+ M    +S + VS + +++  ++KA+  RP++  +P +W+DA + KV+
Sbjct: 110 GMSYRDINQHVEDMYGLNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVK 169

Query: 63  RGGRIVSVAVIIAVGVNSDGRREVLGMEVGTSEAEPIWTEFLRKLTRRGLRGVKLVVSDA 122
             GR VS AV   + +N  G++E+LG+ +  +E    W   L  L  RG++ + +   D 
Sbjct: 170 EDGRYVSKAVYTLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDG 229

Query: 123 HEGLKAAVTKVLSAT-WQRCRVHFMRNVLAHAGKSGRR 159
             G   A+  +   T  Q C +H +RN + +     ++
Sbjct: 230 LTGFPEAIASIFPHTETQLCVIHQIRNSMKYVASKNQK 267