Pairwise Alignments

Query, 410 a.a., TRm5 transposase from Sinorhizobium meliloti 1021

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  134 bits (338), Expect = 4e-36
 Identities = 87/336 (25%), Positives = 164/336 (48%), Gaps = 7/336 (2%)

Query: 24  LREVIRTVMQEVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGKLELRVPQDRS 83
           L  +I+ + +  L+AE+++ L     +  P R   ++G   +T+    G  EL  P+DR+
Sbjct: 27  LGPLIKQLTEAALQAELEQHLAH---DPQPNR---KNGKTPKTIKHPSGNFELDAPRDRN 80

Query: 84  GHFSTELFERYQRS-ERALVATLAEMYVQGVSTRKVKAITEELCGHAFSASSISAINKRL 142
           G F  +L ++ Q +    +   +  M+  G+S R +    E++ G   S +++SAI  +L
Sbjct: 81  GTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGLNVSNATVSAITDKL 140

Query: 143 DESLKAFAERSLEEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQILSVEMAG 202
              LKA+ +R L+  +  + LDA + KV+E G  +S+AV   + ++ +G++ IL + ++ 
Sbjct: 141 IPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLALNMEGKKDILGLHLSE 200

Query: 203 RESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAAWQRCYVHFLRNALDH 262
            E  + W   L  L  RG+K + +   D   G   AI  + P    Q C +H +RN++ +
Sbjct: 201 NEGANYWLSVLTDLNHRGVKDILIACVDGLTGFPEAIASIFPHTETQLCVIHQIRNSMKY 260

Query: 263 LPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQTLTFFRL 322
           +  K+    + +L+ +Y     + A+  L     KW   YP + +           +F+ 
Sbjct: 261 VASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVINSWRRKWHNLSHYFKY 320

Query: 323 PRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTES 358
           P    K + +TN +E ++ + R+ T     FPN  S
Sbjct: 321 PEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENS 356