Pairwise Alignments

Query, 249 a.a., Response regulator from Sinorhizobium meliloti 1021

Subject, 255 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 72/252 (28%), Positives = 102/252 (40%), Gaps = 23/252 (9%)

Query: 1   MRQLDRMENQYTKPLVLICSGNANFYVLLAH---------ILASEGFQTLLLGEEEVVDQ 51
           MR L  +E    K  +L+    A    +L           ++AS+G + L + E+E  D 
Sbjct: 1   MRSLKAVEAPSLKEKILVVDDEAAVRRILTMRLSMAGYQVVVASDGHEALAMFEQEAPD- 59

Query: 52  AALRPITAIILDSAQDPELTVRTCAAIKANEITSRIPTIALISSGNERYYLALLKAGIDE 111
                   I+LD           C  ++     S +P I L + G+    +  L  G D+
Sbjct: 60  -------LIVLDVMLPKLDGYGVCRELRK---LSDVPIIMLSALGDIADRITGLDLGADD 109

Query: 112 NFVRPVSPARLLAYLGSLPHNGADDKQPTDPAREETAAIFGALRIEPGRRLVRYGDEGAQ 171
              +P SP  L A + ++     D                  + I+  RR V    E   
Sbjct: 110 YLPKPFSPKELEARIATILRRLDDSPNALSAPSSPGVLRISDVEIDTNRRQVFQRGERVP 169

Query: 172 FGRIEFNLLRCLLEAPGRVRSRLELIEAAW--PSNRYVQPRTVDVHVARLRRELERLTGR 229
               EF+LL  L   PGRV  R E++E  W  P  R    R VDV+VARLR +LE     
Sbjct: 170 LTYTEFSLLELLFRQPGRVVPRAEILEELWGYPPRRNADLRVVDVYVARLRSKLEADPRN 229

Query: 230 P-LIRTIRATGY 240
           P LI T+R TGY
Sbjct: 230 PELIITVRGTGY 241