Pairwise Alignments

Query, 240 a.a., Response regulator from Sinorhizobium meliloti 1021

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 67.4 bits (163), Expect = 2e-16
 Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 10/237 (4%)

Query: 5   VLIYTCNAELFLLLEYILETEGFPVRHCSDVSELVGTIGARKPLAVLVDCSDRQLEAYGL 64
           +L+   + E+  LL+  L   GF VR   D  E    + A     V++D      + + L
Sbjct: 8   ILLVDDDQEIRELLQTYLSRSGFQVRGVPDGGEFRAALCAEPADLVILDVMLPDEDGFSL 67

Query: 65  CRRIKATRDRPPIAVLTNAPSSDLS------SLGIDIVICSPYDPRHLLAFLKGIQTSLP 118
           CR I+       + ++    SSD +       LG D  +  P+ PR LLA +K +   + 
Sbjct: 68  CRWIRQHERLASMPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELLARIKALLRRVS 127

Query: 119 YGSRPDVSREQIFRHADIEMNVTRIRVMRNGHAVSLSALQFRLLLQLLSMPDVVHSRDDL 178
           +      S    F    ++M   R+    +G  V LS   F LL   L  P  +  RD +
Sbjct: 128 FAQERG-SDVLAFDEWRLDMISHRL-FHADGEEVFLSGADFALLKLFLDHPQQILDRDTI 185

Query: 179 IAAGWPPEAEVEPRTVDIHIGHIRRALNQFG--PDVIRTVRSIGYSLDGLAAPGGKS 233
             A    E     R VD+ +  +R+ L   G  P +IRTVR  GY L     P  +S
Sbjct: 186 ANATRGREVMPLERIVDMAVSRLRQRLRDTGKSPRLIRTVRGSGYLLATQVTPHHES 242