Pairwise Alignments

Query, 240 a.a., Response regulator from Sinorhizobium meliloti 1021

Subject, 229 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 63.2 bits (152), Expect = 4e-15
 Identities = 50/226 (22%), Positives = 106/226 (46%), Gaps = 10/226 (4%)

Query: 5   VLIYTCNAELFLLLEYILETEGFPVRHCSDVSELVGTIGARKPLAVLVDCSDRQLEAYGL 64
           +L+     +L  +L++ LE EG+ V   +   E +    +   L +L+D    ++  + +
Sbjct: 6   ILVVDDEEDLCEILKFNLENEGYEVDTANSAEEALKMDISSYHL-ILLDVMMGEISGFKM 64

Query: 65  CRRIKATRD--RPPIAVLTNAPSSDLS----SLGIDIVICSPYDPRHLLAFLKGIQTSLP 118
              +K  +   R PI  +T   + + +    +LG D  I  P+  R ++A +K +     
Sbjct: 65  ANMLKKDKKTARVPIIFITAKDTENDTVTGFNLGADDYISKPFSLREVIARVKAVLRRT- 123

Query: 119 YGSRPDVSREQIFRHADIEMNVTRIRVMRNGHAVSLSALQFRLLLQLLSMPDVVHSRDDL 178
             +       +   +  + +++T+ +V  +   V L+  +F +LL L+     V SR+D+
Sbjct: 124 -ATMETEKAPERLTYQSLVIDITKKKVSIDDEEVQLTKKEFEILLLLVQNKGRVFSREDI 182

Query: 179 IAAGWPPEAEVEPRTVDIHIGHIRRALNQFGPDVIRTVRSIGYSLD 224
           +A  W  E  V  RT+D++I  +R+ + ++G  ++ T    GY  +
Sbjct: 183 LARIWSDEVYVLDRTIDVNITRLRKKIGEYGKCIV-TRLGYGYCFE 227