Pairwise Alignments

Query, 296 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 1e-46
 Identities = 88/244 (36%), Positives = 147/244 (60%), Gaps = 5/244 (2%)

Query: 48  ARLIALSFSGGTFSHYRRIFTEPLHLEVLFSTIEVAFVVTVAGLLLGFPVAYLMARLSRG 107
           A LI  +F   TF +Y R+  +PL+ +V+  +  +A V T+  L++G+P AY++A++   
Sbjct: 42  ANLIKFAF---TFENYTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEK 97

Query: 108 LAMAVAACVFVPLWTSVLIRSYAWVVLLQRNGIVNKLLADTGVTEGPLKLIYTQGAVILA 167
               +   + VP WT+ LIR+Y   ++L   GI+N+ L   G+ + PL++++T+ AV++ 
Sbjct: 98  WRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIG 157

Query: 168 MTHVLMPFMILPIYSALRALPPDYVRAARNLGAGPIRAFVTVTLPLSLPGIFAGSVMCFV 227
           + ++L+PFMILP+YSA+  L   Y+ AAR+LGA   +  V V LPL++PGI  G ++  +
Sbjct: 158 LVYILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLL 217

Query: 228 LALGFYITPALVGGPSSMLMATLIGQQTTVLLDWPFAAALSTVL-LAVTLLFVLMFRRTL 286
            ALG +    L+GG  ++L+  +I  Q     DWPF AA S  L LA+ ++    +R   
Sbjct: 218 PALGMFYIADLLGGAKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYRAGK 277

Query: 287 SLSK 290
            L+K
Sbjct: 278 LLNK 281