Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (278), Expect = 2e-29
 Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 9/251 (3%)

Query: 44  LFFLLLPTLIVLPMSLSETDYIEFPPQGLTLKWYSAYFNDPDWMTATWFSLKIALATTAT 103
           +FFL  P  I++  S +E+  +     G + KWY   F D   + A   SLK+A   +  
Sbjct: 19  MFFLYAPMFILVFYSFNESKLVTVWG-GFSAKWYGELFRDDQILDAVATSLKVAFFASTM 77

Query: 104 ATVVGTMAALAIVRGSLPF-RSTLQALALGPMIVPHIILGVALYLSFTPL-QLTG--SFY 159
           A ++GTMAA  + R +  + + TL  +   P+++P +I G++L L F  +  L G  +  
Sbjct: 78  AVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLSLLLLFVHMADLLGWPAER 137

Query: 160 GFL---VAHTVLAVPYVIITVTASLQRFDPTLELAALNCGANRLQAFFLVVLPNIVPGVA 216
           G L   +AH+     YV + V++ L+  D ++E AA + GA  L+ FF + +P I P + 
Sbjct: 138 GMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATPLKTFFHITVPMISPALI 197

Query: 217 AAAVFAFLASFDEATVAFFISDIGGKSIGRKMFEDIDFNLTPVIAAVST-VLVATSLLLM 275
           A  + +F  S D+  +A F S  G  ++   +F  +   ++P I A++T +++  SL+  
Sbjct: 198 AGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSPKINALATLIILIVSLIAF 257

Query: 276 GTLHLMNRKSR 286
            + +L  R  +
Sbjct: 258 ISWYLARRADK 268