Pairwise Alignments

Query, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 75/306 (24%), Positives = 117/306 (38%), Gaps = 38/306 (12%)

Query: 54  DPFTKATGIEVV-TVAATNSEMRAKAAAMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLT 112
           + FTK TGI+V+ +   +N  M AK    +KT       Y DG       +   V +   
Sbjct: 44  EQFTKETGIKVIYSTYESNETMYAK----LKT-------YKDGAYDLVVPSTYFVDKMRK 92

Query: 113 EFCRQFADREDLSVNACSAGGALLQST--------------ATLLAYRTGKHGDSVPATW 158
           E   Q  D+  LS N  +    +L                 AT +   + +       +W
Sbjct: 93  EGMLQKIDKSKLS-NFGNLDPEMLNKPFDPNNDYSIPYIWGATAIGINSDEIDPKTVTSW 151

Query: 159 ADMWDTRKFPGERAFPNFDDPWRVMAAALLADGVTRDELFPLDIDRALAKLDQIKPSVSL 218
           AD+W   K   + +    DD   V   AL   G + +   P +I+ A  +L ++ P+V+ 
Sbjct: 152 ADLW---KPEYKSSLLLTDDAREVFQVALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAA 208

Query: 219 WWKTGDQSVQGFRNGEYSLGQIWLTRAKAMQSEGLP--IAWSYKAAFLVGDRIALLKGAP 276
           +    D     +  GE +LG +W   A   +  G P  + W  +      D +++   A 
Sbjct: 209 F--NSDNPANPYMEGEVNLGMVWNGSAWVARQAGTPLEVVWPKEGGIFWMDSLSIPANAK 266

Query: 277 HRDNALKLITFWLNSPAAQAKACEVLSCTPPSSDAIAMMSDEARKTMPQGDDVRDYVIIP 336
           + D ALKLI F L  P    +  E +    P+  A  M+S E         D      I 
Sbjct: 267 NVDGALKLINFLLR-PEIAKQVAETIGYPTPNLAARKMLSPEVANDKSLYPDA---ATIQ 322

Query: 337 DAEWIN 342
             EW N
Sbjct: 323 KGEWQN 328