Pairwise Alignments

Query, 633 a.a., sensor histidine kinase of two-component system from Sinorhizobium meliloti 1021

Subject, 641 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  123 bits (309), Expect = 2e-32
 Identities = 143/645 (22%), Positives = 263/645 (40%), Gaps = 56/645 (8%)

Query: 24  FICLLLVVIFAATGICSAQGAGPVPRVLILYPYDERIPATNIVGEAARTRLVEATSGKVE 83
           FICLL   +F AT + +   +     +LI+  Y+     T++              GK +
Sbjct: 9   FICLLW--LFRATELFAV--SNDQKPILIICSYNPAAHQTSVTISDYMEEY-NKLGGKRD 63

Query: 84  VFSEFLDLSRFPKKGHVDRIARYLAEKYS-DGRPDLVIALGEESTRFIVANRNAIAPDAK 142
           +  E ++   F +      +   +  KY  +  P  +I LG+E+    ++ R++I     
Sbjct: 64  IIIENMNCKSFSEAPLWSGMMTQILSKYQGEKHPAQIILLGQEAWAAYLSQRDSIQVKVP 123

Query: 143 IVFGGFGNATA----------------------EELRLPNDVVGALTEFEIRKTVEMAIG 180
           ++     +                         + + +P    G + ++ I   V M   
Sbjct: 124 VMCSLVSSNIVILPEDTVAGLDAWMPESVDLFTDHMNIPELKSGFINQYNIEDNVRMIKA 183

Query: 181 LQPDARQVVVIAGSAEFDKAWIAAAQEDLIGLPSDIETTYLTGL--SIEEFVERVAALPP 238
             P    +  I+ +        A  ++++   P +I+   + G   +I   VE +  LP 
Sbjct: 184 FYPKTEHIAFISDNTYGGVTMQALVRKEMKKFP-EIDLILMDGRRHTIYTIVEELRHLPE 242

Query: 239 DTIVIVLTVLSDRTGRNFVPRNSLEKIAKAASAPVYGPYSTYLDHGVVGGNAATFESTGT 298
           +T+++V T   D     F+   +   +    + P + P S  L +  +GG    +   G 
Sbjct: 243 NTVIMVGTWRVDMNEGYFMRNATYAMMEVTPTIPTFTPSSVSLGYWAIGGVLPDYRKLGM 302

Query: 299 --AVAGLAIDALAGKAITDITVPQSY-MADSRQLRRWGLSEADLPLGTAVLFKERSLWQE 355
             A+A + ID         ++V  S  + DSR+++ WGL    LP    ++ +  S +Q+
Sbjct: 303 DMALASVQIDRYPADEQQHLSVIGSKAVLDSRKVKEWGLDPDILPFDVQIINQTVSFYQQ 362

Query: 356 YWKEIIAISAFVAAQSLVILSLVLE-----RRRRAAAEFQARHRLLEVIH---LNQSATA 407
           Y  +I +  A V    +++L L +      R +R   +     + L V        +   
Sbjct: 363 YTYQIWSACALVV---ILVLGLCISLFYYFRTKRLKDDLLKSEKDLRVAKDRAEESNRLK 419

Query: 408 GALSASIAHELNQPLGAIRINAETAALMLERPNPDLKLIQQILADIRDDDQRA-GDIIDR 466
            A  A+++HE+  PL +I +       +      + +   QI+    D   R   DI+D 
Sbjct: 420 SAFLANMSHEIRTPLNSI-VGFSDVLAVGGNTEEEQQTYYQIIKTNSDLLLRLINDILDL 478

Query: 467 MRGLLRKRSEIDWQEFDLNDVVRSAIHILHPEAQRRDVTVSSVASAQGLPVRADRVHVQQ 526
            R L   R  + W+E D+  + R  +  +    Q  +  +  V+  +   +  D   +QQ
Sbjct: 479 SR-LEANRVTLTWEECDVVQLCRQVVASVSVSRQSGNQFLF-VSDYESFRMTTDIQRMQQ 536

Query: 527 VILNLAINAMDAMLQAPTAERNLMFQTAMVERNEKVEVSISDTGSGIPSDKLSNIFDAFY 586
           VI+NL  NA        T +  +  + ++ E  E    S++DTG GIP +K   +F+ F 
Sbjct: 537 VIINLMSNA-----DKFTRKGQITLEFSVNEETEMAVFSVTDTGCGIPKEKQKLVFERFE 591

Query: 587 TTKP--TGTGLGLSIARVIIEIYGGKLWADNRPQGGAVFRFVLPL 629
                  GTGLGLSI ++I+  + G +W D+   GGA F F  PL
Sbjct: 592 KLNEYAQGTGLGLSICKLIVHKWKGDIWIDSEYTGGARFMFSHPL 636