Pairwise Alignments

Query, 1087 a.a., DnaE3 DNA polymerase III alpha chain from Sinorhizobium meliloti 1021

Subject, 1110 a.a., DNA-directed DNA polymerase III PolC from Dechlorosoma suillum PS

 Score =  853 bits (2203), Expect = 0.0
 Identities = 484/1107 (43%), Positives = 668/1107 (60%), Gaps = 85/1107 (7%)

Query: 3    YAELQVTTHFSFLRAASSAEELFATARLMGIEALGVVDRNSLAGIVRALEASRATGLRLV 62
            YAEL   ++FSFLR AS  EEL   A  +G  AL V D  S AG VRA  A++A GL+L+
Sbjct: 15   YAELHCLSNFSFLRGASHPEELVQRAVELGYGALAVTDECSFAGSVRAHVAAKAAGLKLI 74

Query: 63   VGCRLDLQDGMSILVYPTDRAAYSRLTRLLTLGKGRGGKANCIIHFDDV----------- 111
             G  + L DG+ +++   +R  Y  L+ L+TL + R  K    +   D+           
Sbjct: 75   HGTEIVLADGLKLVLLAQNREGYGNLSALITLARRRAEKGAYRLTRGDLEGFGPSGALPD 134

Query: 112  --ALYAEGLIGILVPDLADEVCAVQLRKIAEVFGDRAYVSLCLRRRPNDQLQLHELTNLA 169
              AL+  G      PD AD       R +A+ F  R+++++ L   P+D+ +L +L  LA
Sbjct: 135  CLALWVPGPQFDSPPDPADG------RWLAQRFPGRSWLAVELHAGPDDRGRLEQLQQLA 188

Query: 170  VKHRVKTIVTNDVLFHEHGRRQLQDVVTCIRTGMTIDDVGFERERHADRYLKPPEEMARL 229
                +  +   DV  H   RR LQDV+T +R   T+   G     + +R+L+P   +ARL
Sbjct: 189  ADCGLPLLAAGDVHMHSRARRPLQDVLTALRLNTTVFAAGHALHPNGERHLRPRLRLARL 248

Query: 230  FPAYPEALARTMEIVERCRFSLEELVYQYPEEALILGMTAQQSLQHYTWEGVRARYPEGL 289
            +P  PE LA T+ +  RC FSL+EL Y+YPEE +  G+T    L+     G+  RYP+G+
Sbjct: 249  YP--PELLAETLAVAARCTFSLDELRYEYPEEVVPHGLTPAAYLRQEVEAGLAVRYPDGV 306

Query: 290  PTHVEKTIRHELALIETMKYAPYFLTVFSIVRYARSQGILCQGRGSAANSAVCYVLGITS 349
            P      + +EL LI  ++Y  YFLTV+ IVR+ARS+ ILCQGRGSAANSAVCY LGIT 
Sbjct: 307  PEKARAQVEYELGLIARLQYEAYFLTVYDIVRFARSREILCQGRGSAANSAVCYALGITE 366

Query: 350  IDPETNDLLFERFVSQERDEPPDIDVDFEHERREEVIQWIYKTYGHDKAALCSTVTRYRA 409
            +DP  ++LLFERF+S ER EPPDIDVDFEH+RREEVIQ++Y  YG ++AAL   +  YR 
Sbjct: 367  VDPAKSELLFERFISAERGEPPDIDVDFEHQRREEVIQYLYAKYGRERAALTGALITYRT 426

Query: 410  KGAIRDVGKALDLPEDLIRTLSSGI--WSWSETVGERQVRELGLNPDDRRLTLTLRLAQQ 467
            +GA+RD G+AL    + I  L+  +  W   + + ER +R +GL+P+  R+   L +++ 
Sbjct: 427  RGALRDAGRALGFGREQIDALAGTLAWWDRQDELPER-LRAVGLDPESPRVAKWLAVSRA 485

Query: 468  LMGAPRNLSQHPGGFVLTHDRLDDLVPIEPATMADRQVIEWDKDDIEALKFLKVDVLALG 527
            L G PR+LSQH GGFV++   L  LVPIE A MA+R VI+WDKDDI+AL  +KVDVLALG
Sbjct: 486  LRGFPRHLSQHVGGFVISRGPLSRLVPIENAAMAERSVIQWDKDDIDALGLMKVDVLALG 545

Query: 528  MLTCMAKAFALISEHKHEDIDLATIPQEDPATYAMIRKADTLGTFQIESRAQMSMLPRMK 587
            ML+ + +A  ++     + + L  IP+E  A Y M+ + D+LG FQ+ESRAQM+MLPR+K
Sbjct: 546  MLSAIRRALDMLGARDGKPVRLQDIPRESKAVYDMLCRGDSLGIFQVESRAQMAMLPRLK 605

Query: 588  PRTFYDLVIQVAIVRPGPIQGDMVHPYLRRREGKEKVEYPTPELEAVLHKTLGVPLFQES 647
            PR FYDLV+QVAIVRPGPIQGDMVHPYL+RR G+EK+E  +P ++ VL +T GVP+FQE 
Sbjct: 606  PRQFYDLVVQVAIVRPGPIQGDMVHPYLKRRHGEEKIEKISPAVDKVLQRTYGVPIFQEQ 665

Query: 648  AMRVAMVCAGFTGGEADQLRKSMATFKFTGGVSRFKDKLVNGMIRNGYTKEFAEKTFSQL 707
             M++A+V AGFT GEADQLR++MA +K  GG+  F+ KL+ GM   G  + FA + F Q+
Sbjct: 666  VMQLAVVAAGFTPGEADQLRRAMAAWKRKGGLEPFEQKLIRGMQERGLPESFARRIFEQI 725

Query: 708  EGFGSYGFPESHAASFALIAYASNYIKCYFPDVFCAALLNSQPMGFYAPAQIVRDAREHG 767
            +GFG YGFPESHAASFA++ Y S ++K + P  F   LLN+ PMGFYAPAQ+V+DA+ HG
Sbjct: 726  KGFGDYGFPESHAASFAILVYFSAWLKRFEPAAFLCGLLNAHPMGFYAPAQLVQDAQRHG 785

Query: 768  VEVRPICINRSRWDCMLEPIDGSGGH------AVRLGMRLVRGLATADAARIVAARADEP 821
            V V P  +  S W+ +L  ++   GH       VRLG+R + G   A A RIVAAR + P
Sbjct: 786  VTVLPPDVTHSAWESLL--VELLPGHPPARPRTVRLGLREIAGFNQAAAERIVAARQEGP 843

Query: 822  FTSVDDMWRRSGVPVASLVELAEADAFLPSLSLERRDALWAIKALRDEPLPLF------- 874
            F SV D+  R+G+    L  LA A+A L +L+  RR A W   A+ +   P         
Sbjct: 844  FQSVADLAARAGLQRPELERLAAANA-LQALAGHRRAAAWESAAVENTGQPRHHGSRSGH 902

Query: 875  -------------------------TAAADREARAIAEQEE----------------PEV 893
                                     T A  R    + E++E                P V
Sbjct: 903  GQEAEQRKERGGAQAPGRRSSVSDATNATGRSKNGMDERDERVHSLPIQGDLFAALPPPV 962

Query: 894  E----LRQMTDGQNVVEDYSHTGLTLREHPLRFMRDDLAKRRIVTCAQAMTAHDGQWLMA 949
            E    L   T+G+++V DY+  GLTL  HPL  +RD L   R +T A+   A D +   A
Sbjct: 963  EAPPPLPTPTEGEDLVADYATLGLTLGRHPLALLRDRLTAGRFITAAELRAAPDRKLARA 1022

Query: 950  AGLVLVRQRPGSAKGVMFITIEDETGIANIVVWPKLFERSRRVVLGASMMAINGRIQREG 1009
            AG+V  RQRPG+A G++F+T+EDETG  N+++ P+L E+ RR  L A ++ + G+++   
Sbjct: 1023 AGIVTHRQRPGTASGIVFVTMEDETGPINVILRPELVEKQRRETLAARLLGVYGQLESRH 1082

Query: 1010 EVVHLVAQQLFDLSADLSSLAERDGAF 1036
             V HLVA++L DL+  L  LA R   F
Sbjct: 1083 GVTHLVAKRLVDLTPLLGRLATRSRDF 1109