Pairwise Alignments

Query, 1087 a.a., DnaE3 DNA polymerase III alpha chain from Sinorhizobium meliloti 1021

Subject, 1160 a.a., DNA polymerase III subunit alpha from Klebsiella michiganensis M5al

 Score =  373 bits (957), Expect = e-107
 Identities = 297/1073 (27%), Positives = 501/1073 (46%), Gaps = 92/1073 (8%)

Query: 2    RYAELQVTTHFSFLRAASSAEELFATARLMGIEALGVVDRNSLAGIVRALEASRATGLRL 61
            R+  L+V + +S +   +    L   A  +G+ AL + D  +L G+V+   A    G++ 
Sbjct: 5    RFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKP 64

Query: 62   VVGCRLDLQDGM------SILVYPTDRAAYSRLTRLLTLGKGRG-GKANCIIHFDDVALY 114
            +VG    +Q  +       + V   + A Y  LT L++    RG G A  II  D +   
Sbjct: 65   IVGADFHVQSDLLGDELSQLTVLAANNAGYQNLTLLISKAYQRGYGAAGPIIDRDWLIEL 124

Query: 115  AEGLIGILVPDLADEVCAVQLRKIAEV----------FGDRAYVSLCLRRRPNDQLQLHE 164
             EGLI +    + D   ++    +A V          F D  ++ L    R +++  LH 
Sbjct: 125  KEGLILLSGGRMGDVGRSLLRGNMALVDQCVDFYEQHFPDCYFLELIRTGRQDEEPYLHA 184

Query: 165  LTNLAVKHRVKTIVTNDVLFHEHGRRQLQDVVTCIRTGMTIDDVGFERERHADRYLKPPE 224
               LA    +  + TNDV F E G     ++   I  G T+DD    R     +Y++  E
Sbjct: 185  AVGLAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEE 244

Query: 225  EMARLFPAYPEALARTMEIVERCRFSL---EELVYQYPEEALILGMTAQQSLQHYTWEGV 281
            EM  LF   PEAL  T+EI +RC  ++   E  + Q+P       MT +  L   + EG+
Sbjct: 245  EMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTG----DMTTEDYLVKKSKEGL 300

Query: 282  RARYPEGLPTHVEKTIRH---------ELALIETMKYAPYFLTVFSIVRYARSQGI-LCQ 331
              R     P   E+T R          EL +I  M +  YFL V   +++++  G+ +  
Sbjct: 301  EERLEFLFPDPDERTKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP 360

Query: 332  GRGSAANSAVCYVLGITSIDPETNDLLFERFVSQERDEPPDIDVDFEHERREEVIQWIYK 391
            GRGS A S V Y L IT +DP   DLLFERF++ ER   PD DVDF  E+R++VI+ +  
Sbjct: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD 420

Query: 392  TYGHDKAALCSTVTRYRAKGAIRDVGKALDLPEDLIRTLSS------GIWSWSETVGERQ 445
             YG D  +   T     AK  IRDVG+ L  P   +  +S       G+        E Q
Sbjct: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ 480

Query: 446  VRELGLNPDDRRLTLTLRLAQQLMGAPRNLSQHPGGFVLTHDRLDDLVPIEPATMADRQV 505
            + E  +   D  +   + +A++L G  RN  +H GG V+   ++ D  P+         V
Sbjct: 481  LPE--IYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPV 538

Query: 506  IEWDKDDIEALKFLKVDVLALGMLTCMAKAFALISEHKHED----IDLATIPQEDPATYA 561
             ++DK+D+E    +K D L L  LT +  A  +I+  + ++    +D+A IP +D  ++ 
Sbjct: 539  TQFDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEGPLDIAAIPLDDKKSFD 598

Query: 562  MIRKADTLGTFQIESRAQMSMLPRMKPRTFYDLVIQVAIVRPGPIQGDMVHPYLRRREGK 621
            M+++++T   FQ+ESR    ++ R++P  F D++  VA+ RPGP+Q  MV  ++ R+ G+
Sbjct: 599  MLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGR 658

Query: 622  EKVEYPTPE-----LEAVLHKTLGVPLFQESAMRVAMVCAGFTGGEADQLRKSMATFKFT 676
            E++ YP  +     L+ VL  T G+ L+QE  M++A   +G+T G AD LR++M   K  
Sbjct: 659  EEISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGK-KKP 717

Query: 677  GGVSRFKDKLVNGMIRNGYTKEFAEKTFSQLEGFGSYGFPESHAASFALIAYASNYIKCY 736
              +++ +     G  + G   E A K F  +E F  YGF +SH+A++AL++Y + ++K +
Sbjct: 718  EEMAKQRGTFEEGARKRGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAH 777

Query: 737  FPDVFCAALLNSQPMGFYAPAQIVRDAREHGVEVRPICINRSRWDCMLEPIDGSGGHAVR 796
            +P  F AA++ +          +V +    G+++ P  IN   +   +   DG     + 
Sbjct: 778  YPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVND-DGE----IV 832

Query: 797  LGMRLVRGLATADAARIVAARADEP-FTSVDDMWRRSGVPVAS---LVELAEADAFLPSL 852
             G+  ++G+       I+ AR     F  + D+  R+ +   +   L +L  + AF    
Sbjct: 833  YGIGAIKGVGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAF---- 888

Query: 853  SLERRDALWAIKALRDEPLPLFTAAADREARAIA--------------EQEEPEVELRQM 898
                 D L   +A     L     AAD+ A+A A              EQ E      Q 
Sbjct: 889  -----DRLGPHRAALMNSLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQP 943

Query: 899  TDGQNVVEDYSHT-GLTLREHPLRFMRDDLAKRRIVTCAQAMTAHD---GQWLMAAGLVL 954
               Q V++    T GL L  HP+     ++   R V   +    H    G+   AAGLV+
Sbjct: 944  WPEQVVLDGERETLGLYLTGHPINQYLKEI--ERYVGGVRLKDMHPTDRGKVTTAAGLVI 1001

Query: 955  VRQRPGSAKG--VMFITIEDETGIANIVVWPKLFERSRRVVLGASMMAINGRI 1005
              +   + +G  +   T++D +G   ++++    ++ ++++    ++ ++G++
Sbjct: 1002 AARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQV 1054