Pairwise Alignments

Query, 474 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 70/261 (26%), Positives = 105/261 (40%), Gaps = 16/261 (6%)

Query: 1   MVIARSGSKRWISAADTAATKLGLRVGMPAAKAQALVQGLVMIDADTAADLAALERLALW 60
           +++  S  +  +SAA   A + G+R  MP   A+ L    V + +      A + R+ + 
Sbjct: 25  VIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRLCPHGVFV-SGRRHRYAEVSRMVMA 83

Query: 61  AFSQYSPVVAMDPPDGIVMDTEGADHLQGGEDLMLSSLVNRFRGR--GLAARAAIADTWG 118
               +SPVV     D   +D  G + L G  D M   L  R R    GL     +A    
Sbjct: 84  VLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQRLKGRVREATGGLTCSVGLAPVKF 143

Query: 119 AAHALARTTDRETV-IVGRGDAARAANRLPLSSLRLPA---ETVQSLRTLGFTTVGDLAA 174
            A   +     + V I+   D A     LP+   R+P      ++SL  LG  T GD+  
Sbjct: 144 LAKIASDVNKPDGVFILPPEDVAAFLATLPVG--RIPGVGKRMLESLDLLGVRTAGDVLR 201

Query: 175 TPRAPLTLRFGLEVGRRLDQMFGHIAEPIDPIRPAELVEVQKSFAEPIGAPETIEKYVSR 234
            P +    RFG       D+  G    P++P  P      +   AE   A +T ++ V R
Sbjct: 202 HPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPP-----KSESAEVTLAADTADRAVLR 256

Query: 235 LVRQLCLELERRGLGVRRADL 255
             R L  + ER G  +RR  L
Sbjct: 257 --RWLLAQAERVGGSLRRQGL 275