Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 382 a.a., hemolysin secretion protein D from Pseudomonas fluorescens FW300-N2C3

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 100/349 (28%), Positives = 154/349 (44%), Gaps = 42/349 (12%)

Query: 42  AKADVSTA--VRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVR 99
           ++A + TA   R D+ N V  +G+L P R   + ++ S  I ++ V+ GD V  G LLV 
Sbjct: 32  SRAPLVTAPVTRGDIENSVTALGTLQPRRYVDVGAQASGQIQKIHVEAGDEVREGQLLVE 91

Query: 100 FERGALES-------AVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALA 152
            +    ++       ++   KA+     AQ +LA+    R  +L   GA  E     A A
Sbjct: 92  IDPSTQKARLDAGRFSIENLKAQLQEQRAQHDLAQQKFRRQQQLKAGGATREEDVQTAQA 151

Query: 153 DV------LDL-RAQLRSKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQ- 204
           +V      +D+ +AQ+R  QA +   E  L +  + A   G + A    EGQT+    Q 
Sbjct: 152 EVRATQARIDMFQAQIRQAQASLRSDEAELGYTRIYAPMSGTVVAVGAREGQTLNAQQQT 211

Query: 205 --LMTIVELNRLEVDAGVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARI--------- 253
             ++ I  L+ + V A V  + I  ++   +   T      R +S  V +I         
Sbjct: 212 PLILRIARLSPMTVWAEVSEADIGHVKPGMTAYFTTLAGGSRRWSSTVRQILPVPPRPLE 271

Query: 254 -----SPTAD-AGSRAV---RVFIAVDNEEGLLRGGMFTIGDLRVDDQKDVIALPAASIR 304
                SPT   +GS  V    V + VDN +  L   M           KDV+ +P A+++
Sbjct: 272 ASQGGSPTGGRSGSERVVLYTVLLDVDNADRALMTDMTAQVFFVAAQAKDVLTVPIAALQ 331

Query: 305 HDADGFFVLKVEAGVLQRRPVGLGRSWSDRDLVQ-VSGVSEGDVIVTAP 352
            DAD   VL  + G +Q R V  G   SDR   Q V G+SEGD ++  P
Sbjct: 332 -DADQVRVL-ADNGDVQPRTVRTG--VSDRLRTQIVDGLSEGDRVLIGP 376