Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 14/298 (4%)

Query: 58  VRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRKAEAD 117
           V + G + P+ + +L ++ S  ++ L V + D V    +L+        +A+   +A+  
Sbjct: 38  VELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLA 97

Query: 118 ALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQAEVSDAERSLSH 177
           + +AQ   A+A L R  +L  +GA S+    +A A      A ++S QA V  A+ SL +
Sbjct: 98  SATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGY 157

Query: 178 AEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTSRIPLIRLKQSVELT 237
             + A + G++  R VE G+TV   T L+    L+ L V+  +P    P +         
Sbjct: 158 TNITAPYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPYV-------AD 210

Query: 238 VEGFPGRTFSGEVAR-----ISPTADAGSRAVRVFIAVDNEEGLLRGGMFTIGDLRVDDQ 292
           V  F  RT  GE  +     +   AD  S   +  + +      L  GM+   +     Q
Sbjct: 211 VSQFTVRTAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNY-GQ 269

Query: 293 KDVIALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSDRDLVQVSGVSEGDVIVT 350
           ++V+ +P++++   A+   V +V  G     PV LG+ + D   V +SG+  GDV+ T
Sbjct: 270 REVLVVPSSAVLRRAELSAVYRVNNGQRALNPVRLGQVYGDYVEV-LSGLELGDVVAT 326