Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 85/310 (27%), Positives = 148/310 (47%), Gaps = 21/310 (6%)

Query: 46  VSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGAL 105
           V TA   D    +  +G + P +  TLT+  +  I ++  + G  V     LV      L
Sbjct: 46  VVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLV-----LL 100

Query: 106 ESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQ 165
           +SAV   +A   +  A+   A+A  ER   L  +G+ S+ +   A A    L A + S +
Sbjct: 101 DSAV--ERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLK 158

Query: 166 AEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTSRI 225
           A       +++  E++A F GVI  R+V  GQ +   T ++ + + + + +   VP   I
Sbjct: 159 A-------TIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDI 211

Query: 226 PLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGGMFTIG 285
             I L Q V++ V+ +P  +F G ++ I P     S  ++V   + N +G LR GMF   
Sbjct: 212 SRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARA 271

Query: 286 DLRVDDQKDVIALPAASIRHD--ADGFFVLKVEAGV--LQRRPVGLG-RSWSDRDLVQVS 340
           ++ +   ++ + LP  +I +    D  +++  E G   +Q+  V +G RS S   +++  
Sbjct: 272 NIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILE-- 329

Query: 341 GVSEGDVIVT 350
           GV  GDV+VT
Sbjct: 330 GVKPGDVVVT 339