Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 376 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

 Score =  104 bits (259), Expect = 4e-27
 Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 19/368 (5%)

Query: 1   MTISAQCNLQKLA---FATTLAVTIVLSQGR--AIGQVKHGSPIELAKADVSTAVRQDMA 55
           M +     LQ+L     A+ + + +   QGR  A  Q     P+++ KA V T    D+ 
Sbjct: 1   MAVPRTHRLQRLTGWGVASVVLMGVASCQGRQPAAFQGPPALPVDVTKATVETV--NDLT 58

Query: 56  NEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRKAE 115
                +G+L    ++ L  ++   I+ + VQ G +V+ G  +   +   +E+ V    AE
Sbjct: 59  E---YLGALEATEQTILRPQIQGRIVSVAVQPGQIVSVGQPMFVLDSEQVEADVAAANAE 115

Query: 116 ADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQAEVSDAERSL 175
                AQ   A+   ER   L ++G         A  ++   +AQL++ Q        ++
Sbjct: 116 VARQEAQLRDAKITFERQKFLADQGVVPLQNLDNARRELQTAQAQLKAAQQNAVAKSVNV 175

Query: 176 SHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTSRIPLIRLKQSVE 235
            +  VRA   G++    ++ G  V    +L TI   N+L ++  VPT RIP +R  Q V+
Sbjct: 176 QYKTVRAPINGLVGDIRLKIGDFVDTGAELTTITRNNQLFINIPVPTVRIPQLRKGQPVK 235

Query: 236 LTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGGMFTIGDLRVDDQKDV 295
           L          +G V  +SP      + V V + V N +GL+R G     ++ V D+K+ 
Sbjct: 236 LLDPFSKNILATGAVDFVSPVVQQNLQTVLVKVVVPNADGLIRNGQIVQSEI-VWDRKEA 294

Query: 296 IALPAASIRHDADGFFVLKVEAG-------VLQRRPVGLGRSWSDRDLVQVSGVSEGDVI 348
           + +P  ++   A   FV  VE          ++++ V LG  +++R  ++ SG+  G+ +
Sbjct: 295 VLVPTQAVTPLAGANFVYVVEPKPNSPDQFQVRQQKVELGSIFNNRYQIR-SGLKPGETV 353

Query: 349 VTAPLPDL 356
            T  L  L
Sbjct: 354 ATTNLLSL 361