Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 427 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

 Score =  110 bits (274), Expect = 9e-29
 Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 60/405 (14%)

Query: 1   MTISAQCNLQK-----LAFATTLAVTIVLSQGRAIGQVKHGSPIELAKADVSTAVRQDMA 55
           MT+ AQ + +      L   T     I+        + +  SPI     D +   RQ + 
Sbjct: 1   MTVFAQAHARLGLACLLVSITASGCQILPPSSAQTNREQQRSPI--TAVDAAVVERQPLQ 58

Query: 56  NEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRF--------------E 101
              R  G+  P +  +L ++V   ++ L V +GD V +G LL R               E
Sbjct: 59  EATRYTGTTEPFQSVSLRAQVEGQVLGLSVDVGDPVQSGQLLARLDDRLQSTAVVAAAAE 118

Query: 102 RGALESAVTGRKAEADALSAQTELAEAVLE-------RNTRLGERGAASEATRLAALADV 154
             A +S V  ++AE  A  A  E A   L+       R TRL + GA S      A   V
Sbjct: 119 VAARQSEVASQRAEVIAAMASVEQARLQLQQARSDAARLTRLFQAGAISAQEAETAQTAV 178

Query: 155 LDLRAQLRSKQAEVSDAERSLSHAEVR---------------------AEFGGVIAARSV 193
           L     +R+ Q +V   +++++ AE R                     A   G++  RS 
Sbjct: 179 LTAEQAVRTAQQQVQTRQQAVAAAERRVVAQQAIANQEQARRNFTQLIAPVTGLVLERST 238

Query: 194 EEGQTVPLNTQLMTIVELNRLEVDAGVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARI 253
           E G       +++TI + +R++V   V    +  +R+ QSV++ ++ FP +TF+G+++RI
Sbjct: 239 EAGNLAREGDEILTIGDFSRIKVVLRVSELELANLRVGQSVQVRLDAFPKQTFTGQISRI 298

Query: 254 SPTADAGSRAVRVFIAVDNEEGLLRGGMFTIGDLRVDDQKDVIALPAASI-------RHD 306
           +P AD  +R + V I + N +G +  G+     L      D I +P A++         D
Sbjct: 299 APVADRRTRLIPVEITMPNPDGRIGSGLLARVVLS-SSAPDPIVVPEAALSTGETPTTSD 357

Query: 307 ADGFFVLKVEAG--VLQRRPVGLGRSWSDRDLVQVSGVSEGDVIV 349
               FV+K +      + R V LG     R ++Q SG+  G+ IV
Sbjct: 358 RGTVFVVKKQGDRTTTEARSVRLGPRADGRVVIQ-SGLQAGETIV 401