Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 399 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (262), Expect = 2e-27
 Identities = 91/317 (28%), Positives = 136/317 (42%), Gaps = 10/317 (3%)

Query: 39  IELAKADVSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLV 98
           I L   +    VR  +AN     G L      T+ SRV+  +IEL  + G  V  G +L 
Sbjct: 75  IPLVTVEPGLVVRVVVAN-----GRLRAAESVTVRSRVAGQLIELAFEEGARVARGAVLA 129

Query: 99  RFERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLR 158
           R +     S V   +A   +  ++ + AE  L R + L   GA S  TR  A   V  L 
Sbjct: 130 RLDPAIPASVVAQAEAALSSRRSELDQAERDLGRASALQRSGAGSVVTRDDARFAVSRLA 189

Query: 159 AQLRSKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDA 218
             +   +A   +A   L    +RA F G+I  R V+ GQ V  +T L T+V  + L+V+ 
Sbjct: 190 RDIARLEAAAEEARARLEETVIRAPFDGIITERPVDGGQVVGTDTALYTLVATSALDVET 249

Query: 219 GVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTAD--AGSRAVRVFIAVDNEEGL 276
            +  +    + + Q   +   G   R   G V  +SP  D   G R VRV      E   
Sbjct: 250 EIDEALAVSLAVGQPARMIPAGPEPRAIDGRVLWVSPRVDPATGGRLVRVGFL--GEPPA 307

Query: 277 LRGGMFTIGDLRVDDQKDVIALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSDRDL 336
           +  G      + V+ ++  ++LP ASI        VL    GVL RRP+     W   ++
Sbjct: 308 IPVGHSVDITIEVERREGALSLPRASILEARTAPAVLVAVNGVLARRPIRF-IDWPAAEV 366

Query: 337 VQVSGVSEGDVIVTAPL 353
           +   G+S G+ +  APL
Sbjct: 367 IVTEGLSAGEAVALAPL 383