Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 354 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 82/317 (25%), Positives = 146/317 (46%), Gaps = 22/317 (6%)

Query: 34  KHGSPIELAKADVSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNA 93
           K+  P+E      +T ++ D+++      +L   + + + SR++  I  + V+ GD V+ 
Sbjct: 33  KYAVPVE-----TTTVIQGDVSSFYSTTATLEAPQEADVVSRIAGLIESIKVEEGDRVSK 87

Query: 94  GDLLVRFERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALAD 153
           G LL   +          ++ +     A+ E+ E  L R  ++  +   S A  +A L  
Sbjct: 88  GQLLAVID-------AKRQRYDLARSQAEVEIIEQELNRLKKMSNKEFIS-ADSMAKLE- 138

Query: 154 VLDLRAQLRSKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNR 213
             +L+A +  +       + S+    VR+   GV+A R V+ G       QL  +V  + 
Sbjct: 139 -YNLQAAIAKRDLAALQVQESM----VRSPIDGVVAKRYVKAGNMAKEFEQLFYVVNQDE 193

Query: 214 LEVDAGVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNE 273
           L     +P +++  +RL Q  EL        T   +V RISP  D  S   +V ++V N+
Sbjct: 194 LYGIVHLPEAQLQSLRLGQEAELYANKHTKDTIHAKVLRISPIVDPQSGTFKVTLSVPNQ 253

Query: 274 EGLLRGGMFTIGDLRVDDQKDVIALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSD 333
              L+ GMFT  +LR D   +VI +P  ++ +  + + +  V+     RR V LG  + +
Sbjct: 254 NAQLKAGMFTRVELRYDTHSNVITVPYNAVVNQDNQYALYVVQGDNALRREVALG--YRE 311

Query: 334 RDLVQ-VSGVSEGDVIV 349
            D V+ VSG+  G+ IV
Sbjct: 312 ADTVEVVSGLEPGEQIV 328