Pairwise Alignments

Query, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  505 bits (1301), Expect = e-147
 Identities = 319/1025 (31%), Positives = 539/1025 (52%), Gaps = 32/1025 (3%)

Query: 1    MFLTRISINHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVE 60
            M+L+ +S+  PV A ++ +++ V G+ S+ +L V   P+ + PVV V+T Y GAS   +E
Sbjct: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60

Query: 61   SEISRPIEAALNTIGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQEVRDRVARLETKFP 120
            S+I+  +E  L  I GID ITS S  G S + V FE+  D      ++RD VAR +   P
Sbjct: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120

Query: 121  DGVATPQVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGSS 180
            +    PQV +    GQA + + +SS+     ++T    RV+ +R S+ISGV  V + G  
Sbjct: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180

Query: 181  ERQVLVVVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSGF 240
             + + V + P+ +   G+A S + +A+  EN +   G + +      V       +   F
Sbjct: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240

Query: 241  NRIIVAQRN-GYPVYLSEVATILDTGAEVTSLANYQGQTTLGLHIVKVQGANTVEVASAV 299
              ++V + + G P+YL +VA +        S     G   + + IV    AN +EVA  V
Sbjct: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300

Query: 300  RREVSALNAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLNSWRST 359
              EV  +   L K   +L I  D++  I   +S+V  TL   G L +L+++IF+   R+T
Sbjct: 301  HEEVDKVQQFLPK-GTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRAT 359

Query: 360  VITGLTLPISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMGKD 419
            +I  +T+P+S+I  F A Y  GF++N++TLMAL LSIG+++DDAIVV ENI  H++ G+ 
Sbjct: 360  LIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEK 419

Query: 420  PVRAALDGTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFVSF 479
            P+ AA  GT E+G AV++TTL +V VFLP++FM G++G  F +F V +A+AV+ S  ++ 
Sbjct: 420  PLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIAL 479

Query: 480  TLDPMLSSVWCDPQSQKTAKRGFFGQLIERFDQWFEGLASRYRSVIYFTFDYRKTTIAIV 539
            TL P+L S       +   K G F QLI+R    F  L S YR V+     +R     ++
Sbjct: 480  TLTPVLGS----KLLKANVKPGRFNQLIDRL---FARLESGYRQVVSRAIRWRWAAPVVI 532

Query: 540  LGMFVVSLLLVPRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVGQIERA-------- 591
                  S  L+  +  +  P  D+G +   +   +  S + MAA +  +E+         
Sbjct: 533  AACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQG 592

Query: 592  -LREFNYVSSTYSTINSGEMRGFNKALVAVQLVHSSQRRLKTAETLGPIRRRLSRIAGLE 650
             L+ F+  S  +   N+G+  GF    V + L   + R +   E L  +R+ L+ I  + 
Sbjct: 593  FLKSFSIQSPAFGG-NAGDQTGF----VIMILEDWNDRTVTAQEALSQVRKALAGIPDVR 647

Query: 651  ISVGQRSEVVGSIKPLQLSILGDGDEELRRISDHITSVLAAIPGATEIESSIEKLRPTLA 710
            +         GS +P+Q  + G    EL+  ++ +       P  T  +    +  P L 
Sbjct: 648  VFPFMPGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELV 707

Query: 711  VRVRREAASDLGVSIATIGDTLRSLVAGDAISVWNSPDGETHDVVVRLPAAGRENAAQLR 770
            V + ++ A++LG+S+ +I DTL  ++ G  ++ +    GE +DV +R       NAA L 
Sbjct: 708  VTIDKQRAAELGISVKSISDTLEVMLGGKKVTTF-VERGEEYDVYLRGDENSFNNAADLS 766

Query: 771  NLPIATARMDDNGKPIMVLLDQVADVVESTAPAQITRKDLSRDIRISSNIE-GRTLGDVV 829
             + + TA  +      +V LD V  + E  +  ++   +  + + I++N+E G TLG  +
Sbjct: 767  QIYMRTATGE------LVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQAL 820

Query: 830  ADLKAAMTKMDIPVGFRISFGGDAENLTESTAYALQSLAMAVIFIYIILASQFGSFIQPI 889
             D      +  +P    +S+ G++++  E+ +      A+A++  Y++LA+QF SFI P+
Sbjct: 821  -DFLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPL 879

Query: 890  AIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMMLMGLVTKNAILLVDYSNLGVREGKSL 949
             +++T+P+ + G  LGL   G  +N++S IG++ML+G+VTKN IL+V+++N     G   
Sbjct: 880  VVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEF 939

Query: 950  RQSLADAGAVRLRPIVMTTLAMIFGMLPTALGLGEGGAQRAPMAHAIIGGLISSTLLSLV 1009
             +++ DA A RLRPI+MT    + G +P  +  G G   R  +   I  G+  +TL++L+
Sbjct: 940  EKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLL 999

Query: 1010 FVPVV 1014
             +P +
Sbjct: 1000 VIPAM 1004