Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 299 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  139 bits (351), Expect = 6e-38
 Identities = 92/291 (31%), Positives = 146/291 (50%), Gaps = 3/291 (1%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M     DLNLL  LDAL+ ER ++ AA R++LSQPA+S A+ RLR    D L    GR +
Sbjct: 1   MNIYNFDLNLLRVLDALLRERNVSRAAERLSLSQPAVSNALNRLRELLDDPLLVRAGRAM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
            PTPRA AL   +R AL  I+ S+IA +  +PA+S +RFRI ++D++ LV    ++ R+A
Sbjct: 61  QPTPRALALEAPIRHALQQIEHSLIAGEAFDPARSHQRFRIAVTDYVELVCMPALMRRLA 120

Query: 121 REAPGVSFELLPLDDD-PHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNK 179
             APG+   +  L    P E L  G+VD ++   + + S     +   E L       + 
Sbjct: 121 EHAPGIQLAIQHLTPTLPVEALDNGEVDLVLGRFLDVPSRFHVRRWASETLQVALRREHP 180

Query: 180 KLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGT 239
            +   +  + ++ + H+    G + +  V+QWL  + G  R++    P +     +++ +
Sbjct: 181 LVKAGLDLDAFLRLRHLWVH-GGQTRGMVDQWLEAQ-GLERKVVYTTPNYLQAAHIVASS 238

Query: 240 NRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWL 290
           +  A LP +L +YF   +PL+    P     F   I   A    D    WL
Sbjct: 239 DLAAVLPTQLARYFATLLPLQTFDLPFDLGTFALDIVSVAQRQNDAALQWL 289