Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 303 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  124 bits (312), Expect = 2e-33
 Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 6/307 (1%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M    +DLNL +  DA+ TE  LT A + + ++QPA+S A+ARLR  F D LF    + +
Sbjct: 1   MNLNKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
           +PTP A+ +   VR+AL  +++SV      +PAQ+++ FRI ++D    V    + +R+ 
Sbjct: 61  VPTPMAQNIIGPVRNALQLLRVSVQESRTFSPAQANKTFRISMTDLTEAVMLPPLFQRLR 120

Query: 121 REAPGVSFE-LLPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNK 179
           R AP V  E +L    +  + L  G +DF +   +         KL ++  +C     + 
Sbjct: 121 RLAPNVKIESMLAKRRETTKELAAGRLDFAMDAPLNTDPQVRHVKLLEDRYICAMRRGHP 180

Query: 180 KLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGT 239
                ++ E Y+S+ H+     R     +    L + G  R+I L    + +  +++  T
Sbjct: 181 LAKDKLTLEQYLSLSHIHIS-SRRSGLGLVDLALGKMGLQRKIALRSQHYLMATQVIDQT 239

Query: 240 NRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILLQEAS 299
           +   T+P R    F +   L  V  P+        I W    + DP N W+RE +++ A 
Sbjct: 240 DMAVTVPER----FARRHNLHQVDLPVDIQPLETHIYWHESTDQDPANRWMREQMIEIAQ 295

Query: 300 RIDPQSD 306
           ++  Q D
Sbjct: 296 QVTAQQD 302