Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (277), Expect = 2e-29
 Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 5/294 (1%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           +  R +DLNLL  L+ L+  + ++ AA+ +N+SQPA+S A+ RLR  FGD L      E 
Sbjct: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
             T + E L   +   L  I+  ++  D  +P      F I   DF +++   +++ R  
Sbjct: 66  RLTAKGERLCSELERTLNTIR-HMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124

Query: 121 REAPGVSFELLPLDD--DPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTN 178
           + AP +  +++P +     H+ L +   D L++      +   K +LF++    V C  +
Sbjct: 125 QRAPNLKLQIVPYNAYMPLHDYLEK-VADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNH 183

Query: 179 KKLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSG 238
                 I+ E+Y    HV    G  +  +     L +  + R +   +P F+++P LL  
Sbjct: 184 PLANQPITLESYCQSRHVIIS-GNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLIN 242

Query: 239 TNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLRE 292
           T+ IATLP RLV +  Q   + +   P     F     W  +H++ P + W+R+
Sbjct: 243 TDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQ 296