Pairwise Alignments

Query, 217 a.a., NodB chitooligosaccharide deacetylase from Sinorhizobium meliloti 1021

Subject, 204 a.a., polysaccharide deacetylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.4 bits (176), Expect = 6e-18
 Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 16/193 (8%)

Query: 20  DRSIYLTFDDGPNPHCTPEILDVLAEYGVPATFFVIGTYAKSQPELIRRIVAEGHEVANH 79
           +R++YLTFDDGP P  TP +L++L ++ + ATFF++G   +  P+  R +V  GH + NH
Sbjct: 25  ERAVYLTFDDGPIPEVTPWVLELLKKHDIKATFFMVGDNIRKHPDEYRMVVEHGHRIGNH 84

Query: 80  TMTHPDLSTCGPHEVEREIVEASEAIIAACPQAAVRHIRAPYGVWSEEALTRSASAGLTA 139
           T  H         +         E I +          R P+G         +       
Sbjct: 85  TFNHIRGFEYSNPDYLANTRRVDEIIHSDL-------FRPPHGHMGFRQY-YTLRHHYRI 136

Query: 140 IHWSADPRDWS-RPGANAIVDAVLDSVRPGAIVLLHDGCPPDESGALTGLRDQTLMALSR 198
           I W    RD+S R     +++ V   VR G+I+  HD      +G L         AL R
Sbjct: 137 IMWDLVTRDYSKRMRPEQVLNNVKRYVRNGSIITFHDSLKSWNNGNLQ-------YALPR 189

Query: 199 IVPALHERGFAIR 211
            +  L   G+  +
Sbjct: 190 AIEFLKAEGYVFK 202