Pairwise Alignments

Query, 326 a.a., SyrM transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (335), Expect = 5e-36
 Identities = 96/294 (32%), Positives = 141/294 (47%), Gaps = 5/294 (1%)

Query: 28  NLASIDLNLLVDLEALLQYRHITQAAQHVGRSQPAMSRALSRLRGMLKDDLLVAGSRGLV 87
           NL SIDLNLL  LE LL ++HI+QAAQ +  SQPA+SRAL RLR    D LLV       
Sbjct: 7   NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYR 66

Query: 88  LTPLAECLTQMLPSVLDAIRQMM-NLSLAPAQRRWKVTMAMPDHQAVVLLPHLLPRLHER 146
           LT   E L   L   L+ IR M+ +    P       T+   D + ++++P LL R  +R
Sbjct: 67  LTAKGERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQR 126

Query: 147 APHLDIVTDPLLGGALGLLEQGE--IDVVVGQMGAAPLGYLRRRLYADSFTCVLRHNHPA 204
           AP+L +   P     + L +  E   D+++     +P    ++RL+ D++  V+  NHP 
Sbjct: 127 APNLKLQIVP-YNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHPL 185

Query: 205 LAQEWTIEAFAALRHVAIASEPDELFGQIYDRLTKLGLQRGDPMVVSTVLTAAVLIAATD 264
             Q  T+E++   RHV I+          ++ L KL  QR     +        L+  TD
Sbjct: 186 ANQPITLESYCQSRHVIISGNGLGKTDMDHE-LKKLNYQREVVASLPHFSMVPELLINTD 244

Query: 265 SVLVVPSRVATRVAAMLSLAVIPPPVELRPYEVALIWHERCHRDPEHRWLRGEI 318
            +  +P R+ T +     + V   P     + V   WH   H  P H+W+R EI
Sbjct: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEI 298