Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 305 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  127 bits (319), Expect = 3e-34
 Identities = 98/297 (32%), Positives = 148/297 (49%), Gaps = 24/297 (8%)

Query: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65
           +DLNLL+  + LM +RSVT AA  + L QPA+S+A+ARLR+ F D LF   GR +  T R
Sbjct: 9   VDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALARLRTLFDDPLFVRTGRSMEPTAR 68

Query: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125
           A  +A  +  AL  I  ++ S   F+PA S + FRI L+D +       ++ R+  EAP 
Sbjct: 69  ALEIAKLLSPALDSISTAVSSASTFDPATSSQVFRIGLTDEVEFALLPPLLRRLRAEAPD 128

Query: 126 V-------SFELLPPDDNPDELLRRGEVDF-LIFPDVFMSSVHPKAKLFDQTLVSVGCLT 177
           V       ++ L+P       LL  GE+   + + +   ++   K     + ++    L 
Sbjct: 129 VVLVVRRANYLLMP------GLLASGEISVGVCYTEELPANSKRKVLRRPKPML----LR 178

Query: 178 NEQLLGDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLS 237
            + + G LS E Y S  H    F   L   +++ L L HG KR++ L VP FN +  LL+
Sbjct: 179 ADSIPGRLSMEDYCSRPHAMVSFAGDLNGYIDEELAL-HGCKRKVVLAVPQFNGLASLLA 237

Query: 238 GTKRIAIIPLRLANHFAKSIPLRIVKHPLPLLS---FTEAVQWPALHNKDQASIWMR 291
           GT  IA +P   A   A +  +R    PLP  +   F  ++ W    + D A  W+R
Sbjct: 238 GTDIIATVPDYAAAALAANGGVR--AEPLPFQTSQDFELSMAWRGAQDNDPAERWLR 292