Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 344 a.a., transcriptional regulator, LysR family protein from Marinobacter adhaerens HP15

 Score =  111 bits (277), Expect = 3e-29
 Identities = 91/311 (29%), Positives = 141/311 (45%), Gaps = 19/311 (6%)

Query: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65
           +DLNLLV LD L+ +R+VT AA  + ++QPAMS+ + RLR  F D L       +  T R
Sbjct: 14  VDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLKRLRDLFSDPLLVRTSEGMTATER 73

Query: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125
           A  L P +R  L  I+ ++     F+  +S R FRI+ SD+       +V+ R+ +EAP 
Sbjct: 74  ARELQPLVRGILSDIEQAVQDKTPFSALESQRVFRIMASDYAESCLMPRVLRRIRQEAPH 133

Query: 126 VSFELLPPDDNPDELLRRGEVDFLIFP-DVFMSSVHPKAKLFDQTLVSVGCLTNEQLLGD 184
           V+ ++L P D     + +G +D  I   D    S H K  L+ +    +    N  L   
Sbjct: 134 VTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKT-LWTEYFACLMNARNPVLKEP 192

Query: 185 LSFERYMSMGHVAAQ-----FGRALKPSVEQWL------LLEHGYKRRIELVVPGFNLIP 233
            + + Y+   H+         G  + P   Q L      L   G KR+I +    + +  
Sbjct: 193 FTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALSRMGRKRQISVFTRHYQVAM 252

Query: 234 PLLSGTKRIAIIPLRLANHFAKSIPLRIVK-HPLPLLSFTEAVQWPAL--HNKDQASIWM 290
            L      IA +P R A    K  P  +VK  P  +  F   + W  L  HN D    W+
Sbjct: 253 LLAEQHDLIATLPSRAA-WLQKDNPNLVVKVPPFEIPPFELKMAWSPLLQHNADHQ--WL 309

Query: 291 REILLDEAARI 301
           R+++ + A  +
Sbjct: 310 RKLIAEVATEV 320