Pairwise Alignments

Query, 500 a.a., NifD nitrogenase molybdenum-iron protein alpha chain from Sinorhizobium meliloti 1021

Subject, 511 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score =  106 bits (265), Expect = 2e-27
 Identities = 108/366 (29%), Positives = 162/366 (44%), Gaps = 39/366 (10%)

Query: 85  IKDMVHISHGPVGCGQYSWSQRRNYYVGTT--GIDAFVTMQFTSDFQEKDIVFGGDKKLE 142
           ++D V + H P+GC     +    +  G    G+        +S+  E+D+++GG +KL 
Sbjct: 77  VRDAVLVQHSPIGCAAGHINSNAFFRNGLMRRGLAPRNVTGLSSNLIERDMIYGGAEKLR 136

Query: 143 KIIDEIEELFPLNNGVTVQSECPIGLIGDDIEAVSRKKAEEYKTTIVPVRCEGFRGVSQS 202
             I    E       V V + C  G+IGDD+E+V R   +E    +V + CEGF+    S
Sbjct: 137 ATIKAAVERHQ-PKAVFVATSCATGIIGDDVESVVRDCEDELGVPVVAMYCEGFKSKHWS 195

Query: 203 LGHHIANDAIRDWVFDTTEVAYEAGRYD--VNVIGDYNIGGDAWASRILLEEIGLHVVGN 260
            G     DAI+  V           R D  VN+I  +  G D +    +L E+GL    N
Sbjct: 196 SGF----DAIQHGVLRHVVKPKPGPRQDNLVNIIVLW--GSDVFTP--MLAELGLE-ANN 246

Query: 261 WSGDATLAEIERAPTAKLNLIHCYRSMNYICRHMEEKYGVPWME----YNFFGPSQIEAS 316
               A++ EI RA  A  +   CY    Y+   +EE+YGV  ++    Y F G    +A 
Sbjct: 247 ILTVASVDEIARASEAAASATFCYSVGGYLGAALEEQYGVQEIKAPQPYGFDG---TDAW 303

Query: 317 LRQIAKHFGPEIEERAERVIAKYSGLTDAVIDKYWPRLHGKRVMLYVGGLRPRHVITAYE 376
           LR +AK  G   EERAE  IA+        I++   RL G R  + +G      VI    
Sbjct: 304 LRALAKATGR--EERAEAYIAREHARVRPQIERLRERLKGVRGYVAMGAAYAHGVIGVLR 361

Query: 377 DLGMEIVGTGYEFAHNDDYQRTGHYVKEGTL-----IYDDV--------TGYELEKFIER 423
           +LG+E+ G+   F H+  Y    H V++ TL      Y DV          Y+    ++R
Sbjct: 362 ELGVEVPGS-LVFHHDPVYD--SHDVRQDTLGHMIDAYGDVEHFSISNRQPYQFYNLLKR 418

Query: 424 IRPDLV 429
             PD +
Sbjct: 419 SDPDFI 424