Pairwise Alignments

Query, 500 a.a., NifD nitrogenase molybdenum-iron protein alpha chain from Sinorhizobium meliloti 1021

Subject, 458 a.a., nitrogenase from Methanococcus maripaludis S2

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 92/406 (22%), Positives = 161/406 (39%), Gaps = 78/406 (19%)

Query: 85  IKDMVHISHGPVGCGQYSWSQRRNYYVGTTGIDAFVTMQFTSDFQEKDIVFGGDKKLEKI 144
           +K+ + + HG  GC  Y   Q   ++     + +       S   E + V GG++ L+  
Sbjct: 27  VKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVAS-------SSMSEANAVLGGEENLKHA 79

Query: 145 IDEIEELF-PLNNGVTVQSECPIGLIGDDIEAVSR--KKAEEYKTTIVPV--------RC 193
           I  + +++ P   GVT  + C    IGDD+E + R  K   +    IVP+          
Sbjct: 80  IRNVSKIYGPEIIGVT--TSCLSETIGDDVEGIIRLFKTQNDDLPEIVPISTPSYKHTHV 137

Query: 194 EGFRGVSQSLGHHIANDAIRDWVFDTTEVAYEAGRYDVNVIGDYNIGGDAWASRILLEEI 253
           EG+    ++L  ++A  +                   +NVI      GD   ++ +L E+
Sbjct: 138 EGYDSTVKALVENLATPS--------------KPNSKLNVITGMVSPGDIAETKRILREM 183

Query: 254 GLHVV----------GNWSGD--------ATLAEIERAPTAKLNLIHCYRSMNYICRHME 295
           G+  +            + G+         T+ E++    +   +  C +  N   + + 
Sbjct: 184 GIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLC-KHANSAAKFLH 242

Query: 296 EKYGVPWME-YNFFGPSQIEASLRQIAKHFGPEIEERAERVIAKYSGLTDAVIDKYWPRL 354
           E YG+  +  Y   G    +  + ++ K    EI E+  R   K   L DA+ID +    
Sbjct: 243 EAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGK---LIDAMIDAHQHNF 299

Query: 355 HGKRVMLY-----VGGLRPRHVITAYEDLGM--EIVGTGYEF-AHNDDYQRTGHYVKEGT 406
            G++V +Y     V G   R V+    +LGM   IV TG E     +D +      K   
Sbjct: 300 -GRKVAIYGDPDVVVGF-TRFVL----ELGMIPSIVCTGSESKTFVEDIKAVTKDSKHKP 353

Query: 407 LIYDDVTGYELEKFIERIRPDLV-----GSGI--KEKYSVQKMGIP 445
           +I      Y+L + I++ + DL+     GS I   E   + +MG P
Sbjct: 354 VILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFP 399