Pairwise Alignments

Query, 541 a.a., Fis family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 577 a.a., Nif-specific regulatory protein from Dechlorosoma suillum PS

 Score =  378 bits (970), Expect = e-109
 Identities = 236/585 (40%), Positives = 317/585 (54%), Gaps = 60/585 (10%)

Query: 2   RKQDKRSAEIYSISKALMAPTRLETTLNNFVNTLSLILRMRRGGLEIPASEGETKITAAT 61
           R  D     IY ISK L +    + ++   +N +   L MR   + +   EG+  +  A 
Sbjct: 8   RDADLELVTIYEISKILTSSLDFQKSVREALNVMLTHLHMRHAMVSMVQGEGKLHVLGA- 66

Query: 62  RNSGSPSAADYTV----PKAAIDQVMTAGR-LVVPDVCNSELF-----KDQIKWRGIGPT 111
             +G P A    +        + QV+  G  +VVPD+    +F     +D  +  G+   
Sbjct: 67  --AGVPFAVQEDIILDAESGIVGQVLKHGSPMVVPDITADPVFINRTGRDLSQCAGV--- 121

Query: 112 AFIAAAVEVDHETGGMLWFEC--AEESDYDYEEEVHFLSMAANLAGRAIRLHRTISRRER 169
           A IA  V++  E  G+L  +          ++ +V  LS+ A+L G+  +LH+ I+    
Sbjct: 122 ALIAVPVKIGREVVGVLSVDRPPGASKPASFDRDVRLLSLVASLVGQTFKLHQAIA---- 177

Query: 170 TFAEEQQEQQNSRDEQSQSSARQRLLKNDGIIGESTALMTAVDTAKVMAETNSIVLLRGE 229
             AE  Q    +   Q Q   +  +   + +IG S  +          A  NS +LLRGE
Sbjct: 178 --AERAQLMLETHRLQKQLQGKYDV---ENVIGRSKRMKEVFADVHQAAPGNSTILLRGE 232

Query: 230 TGTGKECFAKLIHQHSTRQKKPFIKFNCPALSESLLESELFGHEKGAFTGAIAQRVGRFE 289
           +GTGKE  A  IH  S R K PF+K NC AL E+LLESELFGHEKGAFTGA A+R GRFE
Sbjct: 233 SGTGKEAIAHAIHYLSPRSKGPFVKVNCAALPETLLESELFGHEKGAFTGATAERKGRFE 292

Query: 290 SANGGTLLLDEIGEIPPAFQAKLLRVIQEGEFERVGGTKTLKVDVRLIFATNKDLEMAVQ 349
            A+GGTL LDEIG+I  +FQAKLLRV+QE EFERVGG KT K + RL+ ATN++LE  VQ
Sbjct: 293 MADGGTLFLDEIGDISSSFQAKLLRVLQEHEFERVGGNKTHKANFRLVAATNRNLEEMVQ 352

Query: 350 NGEFREDLYYRISGVPLILPPLRHRDGDIPLLARAFLQRFNEENGRDLHFAPSALDHLSK 409
            G+FR DLY+R++ V ++LPPLR R  DIPLL   FL RFN EN R L   P A++ L  
Sbjct: 353 KGDFRADLYFRLNVVAILLPPLRERKEDIPLLVDFFLSRFNRENNRKLTITPGAVEILQH 412

Query: 410 CKFPGNVRELENCVRRTATLARSKTITSSDFACQTDQCFSSRLWKGVHCSHGHIEIDA-- 467
           C +PGNVRELENC+ R AT+ R   I  SD  CQ  QCFSS L +       H  +D   
Sbjct: 413 CNWPGNVRELENCIERAATMTRGALIRESDMRCQKGQCFSSVLLESSASRACHPVMDMPG 472

Query: 468 --PAGTT---------------------PLLGAPANDVPP--------KEPGSAGVASNL 496
             P G T                     P++ APA    P         +  + G  + +
Sbjct: 473 THPGGHTTFPAREPIQPQSQPVHFRDPIPVVAAPARPAMPAAAPPDYGDDDLAEGSDAFV 532

Query: 497 IERDRLISALEEAGWNQAKAARILEKTPRQVGYALRRHGVDVRKL 541
            ER+RLI A+E  GW QAKAAR+L  TPRQ+GYAL++  ++V++L
Sbjct: 533 SERERLIEAMERCGWVQAKAARLLNLTPRQIGYALKKFNIEVKRL 577