Pairwise Alignments

Query, 490 a.a., NifB FeMo cofactor biosynthesis protein from Sinorhizobium meliloti 1021

Subject, 297 a.a., radical SAM protein from Methanococcus maripaludis S2

 Score =  197 bits (500), Expect = 5e-55
 Identities = 103/285 (36%), Positives = 167/285 (58%), Gaps = 16/285 (5%)

Query: 50  HPCFSEEAHHYFARMHVAVAPACNIQCNYCNRKY--DCANESRPGVASEKLTPDQAVRKV 107
           HPC++E+ HH   R+H+ VAP CNI C +C R    +   E RPGV+   + P +    +
Sbjct: 16  HPCYNEKLHHKIGRVHLPVAPKCNIACRFCKRSIGDESVCEDRPGVSHHIMKPAEVENYL 75

Query: 108 IAVANEVPQLSVLGIAGPGDACYDWKKTRATFERVAREIPDIRLCISTNGLSLPDHVDEL 167
             +  + P + V GIAGPGD+ ++ ++T  T E +  + PD+  C+STNGL LP + + L
Sbjct: 76  NDLLEKSPNIKVAGIAGPGDSLFN-EETFETLEVLKEKFPDLVRCLSTNGLLLPKYAERL 134

Query: 168 AEMNVDHVTITINMVDPRVGVKIYPWIYYGQRRHTGIDAARILHERQMLGLEMLAERGIL 227
           AE+ V  VT+T+N VDP++  +I  WIYY  + + G + A IL + Q+ G++ LAE  + 
Sbjct: 135 AELGVKTVTVTVNAVDPKIQAQIVDWIYYEGKVYRGEEGAEILIKNQIEGVKKLAEFDVA 194

Query: 228 TKVNSVMIPGVNDEHLIEVNKVVKGRGALLHNVMPLISNRIHGTYYGLTGQRGPEAFELQ 287
            K+N+V+IP +N +H++E+ K  + + A +HNV+PLI        Y +   R P   E+ 
Sbjct: 195 VKINTVLIPEINMDHIVEIAKTFE-KDAFVHNVIPLI------PMYKMENLRKPTCDEIS 247

Query: 288 ALQDRLEG-TKLMRHCRHCRADAIGLLG-----DDRGHEFTLAEI 326
            ++D  E      R C+ CRADA+GL+      +++G E  + ++
Sbjct: 248 NIRDTAEEYLHQFRACQQCRADAVGLVTEHKHLEEKGKELNIYDL 292