Pairwise Alignments

Query, 359 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 374 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  288 bits (737), Expect = 2e-82
 Identities = 159/343 (46%), Positives = 219/343 (63%), Gaps = 5/343 (1%)

Query: 6   LQIRGIRKEY-GPVTAVQDVTLDVAQGEFLTFLGPSGSGKSTTLYILAGFENPTRGDILL 64
           +  RG++K Y G    V+D+ LD+ +GEFLT LGPSGSGK+T+L +LAGFE PT G+ILL
Sbjct: 15  VSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILL 74

Query: 65  NGETLLATPSHKRNIGMVFQRYTLFPHLSVGENIAFPLKVRRLPKAEIDAKVRAMLKLVR 124
            G ++   P HKR+IGMVFQ Y LFPH++V EN+AFPL VR L K+++  +V+ +L +V+
Sbjct: 75  AGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGLNKSDVSDRVKRVLSMVQ 134

Query: 125 LEGFEDRKPAQMSGGQQQRVALARALAYDPPVLLMDEPLSALDKKLREEIQHEIRRIHQQ 184
           L+ F  R PAQ+SGGQQQRVALARAL ++P ++LMDEPL ALDK+LRE +Q EI+ +HQ+
Sbjct: 135 LDSFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQR 194

Query: 185 TEVTILYVTHDQEEALRLSDRIAVFSKGVIDQIGTGPELYANPATRFVAEFIGDSDFLPC 244
             VT++YVTHDQ EAL +SDR+AVF +G I QI     LY  P   FVA FIG+++ L  
Sbjct: 195 LGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNTFVANFIGENNRLNG 254

Query: 245 DVVSTVNGRAEIAVCGSMTFSNIPLHGTASLGSKAALMLRPERLLLSKTKSDI--GLPVT 302
            + S    R  + +        + ++     G    L +RPER+ L+             
Sbjct: 255 RLHSQTGDRCLVELGRGEKVEALAVN-VGKPGEPVTLSIRPERVSLNGVSEQCVNRFSGR 313

Query: 303 VSDITFLGNNVHVATKTRKGNDLSVRLPFGHEAISGLNRGDAV 345
           V++  +LG++V V  +    ND  V+ P   E   GL  GD V
Sbjct: 314 VAEFIYLGDHVRVRLEVCGKNDFFVKQPIA-ELDPGLAVGDVV 355