Pairwise Alignments

Query, 359 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 383 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  315 bits (808), Expect = 1e-90
 Identities = 175/371 (47%), Positives = 240/371 (64%), Gaps = 25/371 (6%)

Query: 2   NRPFLQIRGIRKEYGPVTAVQDVTLDVAQGEFLTFLGPSGSGKSTTLYILAGFENPTRGD 61
           N+  + +R + K YG   AV D++L++  GEFLTFLG SGSGKSTTL +LAGFE P+ G+
Sbjct: 12  NKTLVSLRNLNKHYGDFAAVDDISLEIQDGEFLTFLGSSGSGKSTTLSMLAGFETPSSGE 71

Query: 62  ILLNGETLLATPSHKRNIGMVFQRYTLFPHLSVGENIAFPLKVRRLPKAEIDAKVRAMLK 121
           IL+ G++L+  P HKR+IGMVFQRY+LFPHLSV +NIAFPL +R+L  AE + +V AMLK
Sbjct: 72  ILVGGKSLVNVPPHKRDIGMVFQRYSLFPHLSVRDNIAFPLAIRKLASAERERRVDAMLK 131

Query: 122 LVRLEGFEDRKPAQMSGGQQQRVALARALAYDPPVLLMDEPLSALDKKLREEIQHEIRRI 181
           LV+L  F  R+P+Q+SGGQQQRVA+ARAL Y+P +LLMDEPL ALDKKLRE++Q E+R++
Sbjct: 132 LVQLGEFAHRRPSQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKKLREDLQDELRQL 191

Query: 182 HQQTEVTILYVTHDQEEALRLSDRIAVFSKGVIDQIGTGPELYANPATRFVAEFIGDSDF 241
           H++  +TI+YVTHDQEEA+RLS RIA+FS G I  +G+G +LY NP   FVA F+G+S+F
Sbjct: 192 HRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGSGYDLYQNPPNAFVASFLGNSNF 251

Query: 242 LPC----DVVSTVNGRAEIAVCGSMTFSNIPLHGTASLGSKAALMLRPERLLLSKTKSDI 297
           L      + V+T  G++           +I L           LM+RPE+ L    +   
Sbjct: 252 LKLKAQGNAVATFEGQS----------LSIRLTAGLQTDQDVLLMVRPEKALALSVEQAA 301

Query: 298 GLPVT---------VSDITFLGNNVHVATKTRKGNDLSVRLPFGHEAISGLNRGDAVWLR 348
             P+          V ++ FLG +   +  T  G  ++V+      A   L  GD V +R
Sbjct: 302 QEPLAAGWNEVSAKVVEVLFLGESQTCSVVTSGGTAMTVKAL--SAAGMPLKAGDPVRVR 359

Query: 349 FDAGSAHVFGQ 359
           +    A V+ Q
Sbjct: 360 WATADACVYTQ 370