Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 365 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 27/280 (9%)

Query: 46  FTEKTGINVLQDGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK 105
           F + TGI  + D       L+  + A    +DVV     +  +  K G  +KLD + +  
Sbjct: 46  FEKATGIKPVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKAQLPN 105

Query: 106 -SKLDPRFV---------TDYSVGSFYYSFVIGCNKDAVDACP-----KTWADLFDAQ-- 148
            + LDP  +           Y+V   + +  IG N + + A        +WA LF+ +  
Sbjct: 106 YANLDPVLLKRLEKNDPGNQYAVPYLWGTNGIGYNVEKIKAVLGVDKIDSWAMLFEPENI 165

Query: 149 -KFPGMRAFYKWSAPGVIEAALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQS 207
            K       +  S   +I A L   G++P+   P D  +A  +L  I+  + +++     
Sbjct: 166 KKLSNCGVSFLDSGDEMIPAMLNYLGLNPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYI 225

Query: 208 QQL----LASAEAPFGSVWNGRMTALAQSGINVETSW----EQNITAADALVVPKGSRNK 259
             L    +  A    G ++  R  A +++G  VE ++    E      D L +P+ + N 
Sbjct: 226 SDLANGEICVAAGFSGDIFQARERA-SEAGKGVEIAYVIPKEGGNLWFDMLAIPRDATNV 284

Query: 260 EAAMQFIALATSPEAQADLAKITGYAPINLDSPKMMDPEL 299
           + A  FI     PE  A ++   GYA  N  + ++MD ++
Sbjct: 285 KQAHAFINYVLKPEVIAQVSDTVGYANPNPKAGELMDQKV 324