Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  179 bits (455), Expect = 7e-50
 Identities = 118/348 (33%), Positives = 179/348 (51%), Gaps = 14/348 (4%)

Query: 1   MNRIFVLAATAATIATAMPATAA-DLVFTSWGGTTQDAQ-KIAWAEKFTEKTGINVLQDG 58
           M R   L A A  +  A  A A  DL   S+GG  + AQ K  +A       G  V  + 
Sbjct: 1   MLRSLKLTALALGMMGAAHAMAGPDLTVVSFGGANKAAQVKAFYAPWEAAGNGKIVAGEY 60

Query: 59  PTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDKSKLDPR-FVTDYS 117
             +  K+KAMV+  +V+WD+V+VE    ++   + + E LD ++  KS+   +  +    
Sbjct: 61  NGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEPLDPALFGKSEDYVKGAIQPCG 120

Query: 118 VGSFYYSFVIGCNKDAVDACPKTWADLFDAQKFPGMRAFYKWSAPGVIEAALLADGVSPD 177
           VG F +S V+  N D + + P +W D +D +KFPG R   K  A   +E AL+ADGV+P 
Sbjct: 121 VGFFVWSTVLAYNADKLASAPTSWVDFWDTKKFPGKRGLRK-GAKYTLEFALMADGVAPK 179

Query: 178 KLYPL-----DLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQS 232
            +Y +       DRAFKKLD +K  I WW  GAQ  Q LAS +    S +NGR+ A+ Q 
Sbjct: 180 DVYKVLASKDGQDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAV-QK 238

Query: 233 GINVETSWEQNITAADALVVPKG--SRNKEAAMQFIALATSPEAQADLAKITGYAPINLD 290
             N++  W   I   DA  +PKG       AA +FIA +  P+ Q   ++   Y P N  
Sbjct: 239 ESNLKVVWNGGIYDFDAWAIPKGLDKTRAAAAKKFIAYSVMPQQQKTYSENIAYGPANTQ 298

Query: 291 SPKMMDPELANTLPDA--QTASQVNADMNYWAENRDAIGERWYAWQAK 336
           +  ++  E+   +P      A+QV  D+++WA+N + + +R+ +W AK
Sbjct: 299 AVPLLSKEILKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK 346