Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

 Score =  189 bits (481), Expect = 7e-53
 Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 13/346 (3%)

Query: 1   MNRIFVLAATAATIATAMPATAADLVFTSWGGTTQDAQKIAWAEKFTEKTGINVLQDGPT 60
           M+    L+A A  +  A  ATA  L   S+GG  + AQ  A+ + + E  G   +  G  
Sbjct: 1   MSNYLKLSALALGLVCAGQATANSLTAVSFGGANKQAQVKAFYQPW-EAAGHGRIVAGEY 59

Query: 61  --DYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDKSK-LDPRFVTDYS 117
             +  K+KAMV+ N+V+W++V+VE    ++   +GL E+LD S++  S       +    
Sbjct: 60  NGEMAKVKAMVDTNSVSWNLVEVESPELSRGCDEGLFEELDPSIVGNSDDFVEGAIQPCG 119

Query: 118 VGSFYYSFVIGCNKDAVDACPKTWADLFDAQKFPGMRAFYKWSAPGVIEAALLADGVSPD 177
           VG F +S V+  N D + + P +WAD +D +KFPG R   K  A   +E AL+ADGV   
Sbjct: 120 VGFFVWSTVLAYNADKLKSAPASWADFWDTEKFPGKRGLRK-GAKYTLEFALMADGVPVK 178

Query: 178 KLYPL-----DLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQS 232
            +Y +       +RAF+KLD +K +I WW  GAQ  Q LAS +    S +NGR+ A+ Q+
Sbjct: 179 DVYKVLATKDGQNRAFRKLDQLKPNIQWWEAGAQPPQFLASGDVVMSSAYNGRIAAV-QN 237

Query: 233 GINVETSWEQNITAADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGYAPINLDSP 292
             N++  W   I   D+  +PKG++++E A +FIA    P+ Q   A+   Y P N  + 
Sbjct: 238 ESNLQIVWSGGIYDFDSWAIPKGAKSQEQARKFIAFTVEPQQQKAYAENIAYGPANTQAV 297

Query: 293 KMMDPELANTLPDA--QTASQVNADMNYWAENRDAIGERWYAWQAK 336
            ++D +    +P A    A QV  D+ +WA+  + + +R+ AW A+
Sbjct: 298 SLLDEKRLAQMPTAPENIADQVAMDVTFWADYGEQLEQRFNAWAAR 343