Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 5e-18
 Identities = 82/345 (23%), Positives = 146/345 (42%), Gaps = 33/345 (9%)

Query: 1   MNRIFVLAATAATIATAMPATAA----DLVFTSWGGTTQDAQKIAWAEKFTEKTGINVLQ 56
           M ++  L A +A   + +  TAA    +LVF +WG            E+FT++TGI V+ 
Sbjct: 1   MKKLATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGI----LEQFTKETGIKVIY 56

Query: 57  DGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLD------FSVIDKSKLDP 110
                   L A ++ +   +D+V     + A+   +G+L+K+D      F  +D + LD 
Sbjct: 57  STYESNETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDK 116

Query: 111 RF--VTDYSVGSFYYSFVIGCNKDAVDACP-KTWADLFDAQKFPGMRAFYKWSAPGVIEA 167
            +    DYS+        +  N D  D    ++W DL+  +   G           V   
Sbjct: 117 PYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPE-LKGQLMLMD-DTREVFHI 174

Query: 168 ALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMT 227
           AL   G S +      +D A+ +L  +  +++ ++    +   L S E   G +WNG   
Sbjct: 175 ALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYL-SGEVGLGMLWNGSAA 233

Query: 228 ALAQSGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGY- 284
           A  + G+ ++  +  E  I   D   +  G++N +AA + I     PE    +++ TGY 
Sbjct: 234 AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYL 293

Query: 285 APINLDSPKMMDPELANTLPDAQTASQVNADMNYWAENRDAIGER 329
             +   + K  D  +A   P     SQ + D   W   + A+G++
Sbjct: 294 TGVKASNDKFQD--VAPLFP-----SQEDLDRVEW---QSAVGDK 328