Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 19/312 (6%)

Query: 2   NRIFVLAATAATIATAMP-ATAADLVFTSWGGTTQDAQKIAWAEKFTEKTGINVLQDGPT 60
           N++F  A  AA + T    A   +L F +W             E FT++TGI V+     
Sbjct: 3   NKLFASALCAAALFTTNAMAKDQELYFYNWSEYIPSEV----LEDFTKETGIKVIYSTYE 58

Query: 61  DYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDKSK-LDPRFV------ 113
               + A ++     +D+V     + ++  K+G+L+++D S +   K LDP ++      
Sbjct: 59  SNESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118

Query: 114 -TDYSVGSFYYSFVIGCNKDAVD-ACPKTWADLFDAQKFPGMRAFYKWSAPGVIEAALLA 171
              +S+   + +  IG N D +D    K W DL+DA K+ G        A  V   AL  
Sbjct: 119 GNKFSIPYIWGATGIGINTDMLDKKSLKNWGDLWDA-KWAGQLMLMD-DAREVFHIALSK 176

Query: 172 DGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQ 231
            G SP+   P ++  A+++L  +  +++ ++    +   LA  E   G +WNG      Q
Sbjct: 177 LGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLA-GEVSLGMLWNGSAYMARQ 235

Query: 232 SGINVETSWEQNITA--ADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGYAPINL 289
            G  ++  W +  T    D++ +P G++N EAA + I     PE  A +A   GY     
Sbjct: 236 EGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVK 295

Query: 290 DSPKMMDPELAN 301
            +  ++  E AN
Sbjct: 296 TAHDLLPKEFAN 307