Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score =  103 bits (258), Expect = 5e-27
 Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 36/322 (11%)

Query: 11  AATIATAMPATAAD----LVFTSWGGTTQDAQKIAWAEKFTEKTGINVL----QDGPTDY 62
           A  +A  M A  AD    L F +W     +       E+FT++TGI V+    +   T Y
Sbjct: 11  AGALAVGMSAAHADDSKTLYFYNW----TEYVPPGLLEQFTKETGIKVIYSTYESNETMY 66

Query: 63  GKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK-SKLDPRFVT------- 114
            KLK   +     +D+V     +  +  K+G+L+K+D S +     LDP  +        
Sbjct: 67  AKLKTYKDG---AYDLVVPSTYFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLNKPFDPNN 123

Query: 115 DYSVGSFYYSFVIGCNKDAVDACPKT---WADLFDAQKFPGMRAFYKWSAPGVIEAALLA 171
           DYS+   + +  IG N D +D  PKT   WADL+  +    +       A  V + AL  
Sbjct: 124 DYSIPYIWGATAIGINSDEID--PKTVTSWADLWKPEYKSSL--LLTDDAREVFQVALRK 179

Query: 172 DGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQ 231
            G S +   P +++ A+ +L  +  ++  ++    +   +   E   G VWNG      Q
Sbjct: 180 LGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYM-EGEVNLGMVWNGSAWVARQ 238

Query: 232 SGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGYAPINL 289
           +G  +E  W  E  I   D+L +P  ++N + A++ I     PE    +A+  GY   NL
Sbjct: 239 AGTPLEVVWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAKQVAETIGYPTPNL 298

Query: 290 DSPKMMDPELAN---TLPDAQT 308
            + KM+ PE+AN     PDA T
Sbjct: 299 AARKMLSPEVANDKSLYPDAAT 320