Pairwise Alignments

Query, 243 a.a., cbb3-type cytochrome c oxidase subunit II from Sinorhizobium meliloti 1021

Subject, 206 a.a., cytochrome-c oxidase, cbb3-type subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  220 bits (560), Expect = 2e-62
 Identities = 112/226 (49%), Positives = 147/226 (65%), Gaps = 32/226 (14%)

Query: 5   DKHALLERNATLLLVGSLLVVSIGGIVEIAPLFYLENTIEKVEGMRPYSPLELAGRDIYV 64
           ++H LLERN  LL +  +  +S G +VEI PL + + T E+V+ ++PY+ L+L GRDIY+
Sbjct: 7   NRHELLERNVGLLAIFIVFAISWGALVEITPLIFQKQTTEEVQNLKPYTALQLEGRDIYI 66

Query: 65  REGCYVCHSQMIRPFRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGDRYSNEWH 124
           REGC VCHSQM+RPFR E ERYGHYS+A ES+++HPF WGSKRTGPDLARVG RYS+EWH
Sbjct: 67  REGCNVCHSQMVRPFRSETERYGHYSVAGESVWEHPFLWGSKRTGPDLARVGGRYSDEWH 126

Query: 125 VQHMIEPRSVVPESVMPSYAFLKDTPLE--VTNIAMNLEANRAVGVPYTDEMIDNATADL 182
             H++ PR +VPES MP++ +L    L+   T   M L  ++  GVPYTDE I NAT D+
Sbjct: 127 RVHLLNPRELVPESNMPAFPWLAKNTLDGKYTQQKMTLFRDK-FGVPYTDEQIANATKDV 185

Query: 183 KAQADPDADASGVEARYPKAKLGDFDGDPQRLSEMDALIAYLQMLG 228
           + +                             +EMDA+IAYLQ LG
Sbjct: 186 EGK-----------------------------TEMDAIIAYLQSLG 202