Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 303 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  120 bits (302), Expect = 3e-32
 Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 6/301 (1%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M    +DLNL +  DA+ TE  LT A + V ++QPA+S A+ARLR  F D LF    + +
Sbjct: 1   MNLNKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLA 120
           +PTP A+ +   VR+AL  +++SV      +PAQ+++ FRI ++D    V    + +RL 
Sbjct: 61  VPTPMAQNIIGPVRNALQLLRVSVQESRTFSPAQANKTFRISMTDLTEAVMLPPLFQRLR 120

Query: 121 REAPGVSFE-LLPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNE 179
           R AP V  E +L    +  + L  G +DF +   L         KL  +  +C     + 
Sbjct: 121 RLAPNVKIESMLAKRRETTKELAAGRLDFAMDAPLNTDPQVRHVKLLEDRYICAMRRGHP 180

Query: 180 QLLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLPHT 239
               +L+ E+Y+S+ H+     R          L + G +R++ L    + +   ++  T
Sbjct: 181 LAKDKLTLEQYLSLSHIHIS-SRRSGLGLVDLALGKMGLQRKIALRSQHYLMATQVIDQT 239

Query: 240 NRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQEAS 299
           +    +P R    F +   L  V  P+        + W    ++DP N WMRE +++ A 
Sbjct: 240 DMAVTVPER----FARRHNLHQVDLPVDIQPLETHIYWHESTDQDPANRWMREQMIEIAQ 295

Query: 300 R 300
           +
Sbjct: 296 Q 296