Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 344 a.a., transcriptional regulator, LysR family protein from Marinobacter adhaerens HP15

 Score =  112 bits (281), Expect = 1e-29
 Identities = 90/309 (29%), Positives = 143/309 (46%), Gaps = 19/309 (6%)

Query: 6   LDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65
           +DLNLLV LD L+ ER +T AA  + ++QPAMS  + RLR  F D L       +  T R
Sbjct: 14  VDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLKRLRDLFSDPLLVRTSEGMTATER 73

Query: 66  AEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREAPG 125
           A  L P VR  L  I+ +V    P +  +S R FRI+ SD+       RV+ R+ +EAP 
Sbjct: 74  ARELQPLVRGILSDIEQAVQDKTPFSALESQRVFRIMASDYAESCLMPRVLRRIRQEAPH 133

Query: 126 VSFELLPLDDDPYELLRRGDVDFLVLP-DLFMSSAHPKAKLFAEALVCVGCPTNEQLLGE 184
           V+ ++L   D  +  + +G +D  +   D    S H K  L+ E   C+    N  L   
Sbjct: 134 VTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKT-LWTEYFACLMNARNPVLKEP 192

Query: 185 LSFEKYMSMGHVAAQ-----FGRALKPSFEQWL------LLEHGFKRRVELVVPGFTLIP 233
            + + Y+   H+         G  + P   Q L      L   G KR++ +    + +  
Sbjct: 193 FTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALSRMGRKRQISVFTRHYQVAM 252

Query: 234 PLLPHTNRIAIIPLRLVKYFEQTIPLRIVKHP---LPPLWFTEAVQWPALHNKDPGNIWM 290
            L    + IA +P R   + ++  P  +VK P   +PP  F   + W  L   +  + W+
Sbjct: 253 LLAEQHDLIATLPSR-AAWLQKDNPNLVVKVPPFEIPP--FELKMAWSPLLQHNADHQWL 309

Query: 291 REILLQEAS 299
           R+++ + A+
Sbjct: 310 RKLIAEVAT 318