Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 316 a.a., transcriptional regulator LeuO from Klebsiella michiganensis M5al

 Score =  104 bits (259), Expect = 3e-27
 Identities = 87/304 (28%), Positives = 136/304 (44%), Gaps = 12/304 (3%)

Query: 2   RFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELI 61
           + R +DLNLL   DA+M E+ +T AA  + +SQPA+S A++RL+  F DELF   GR + 
Sbjct: 20  QLRMVDLNLLTVFDAVMQEQNITRAAHSLGMSQPAVSNAVSRLKVMFNDELFVRYGRGIQ 79

Query: 62  PTPRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRII----LSDFMTLVFFERVVE 117
           PT RA  L  +VR AL  +Q + +      P  S+R F +     L + +T V F +V E
Sbjct: 80  PTARAYQLFGSVRQALQLVQ-NELPGSGFEPLSSERVFNLCVCSPLDNALTSVIFNKVGE 138

Query: 118 RLAREAPGVSFEL-LPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCP 176
                AP +       L+ +    LR  +++F+V  + F         LF + +V V   
Sbjct: 139 ----IAPNIHLVFKSALNQNTEHQLRYQEIEFVVGYEEFRRPEFACVPLFKDEMVLVASR 194

Query: 177 TNEQLLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLL 236
            + ++ G +         H      R    SF Q        + R+         +  ++
Sbjct: 195 KHPRISGPMMENDIYQEEHAVVALDR--YASFSQPWYDTADKQSRIAYQGNAMVSVLNVV 252

Query: 237 PHTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQ 296
             TN +AI P  L   F   + L+I+  PL     T  + W     +D G+ WM E+L+ 
Sbjct: 253 SQTNMVAIAPRWLASEFADKLDLQILPLPLKVNSRTCYLSWHEAAGRDKGHQWMEELLVN 312

Query: 297 EASR 300
              R
Sbjct: 313 ICKR 316