Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 305 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  126 bits (316), Expect = 7e-34
 Identities = 96/301 (31%), Positives = 144/301 (47%), Gaps = 23/301 (7%)

Query: 6   LDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65
           +DLNLL    A++ ER LT A  R+ LSQPA+S ++ RLRT F D LF      + PTP 
Sbjct: 7   VDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQPTPI 66

Query: 66  AEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREAPG 125
           A  L+  V  AL  ++ ++   +  +PA S R FR+ LSD   L +   + E L R+AP 
Sbjct: 67  ALELSTIVSRALDTVREALRYAEHFDPAVSTRTFRLSLSDAGELAYLPPICEALHRQAPR 126

Query: 126 VSFELLPLD-DDPYELLRRGDVDFLV--LPDLFMSSAHPKAKLFAEALVCV-----GCPT 177
           V   + PL  ++  + LR   +DF +  LP L   + H    LF E  VC+     G P 
Sbjct: 127 VRLRIEPLPVEEMEDALRASRLDFAIGNLPTLTARTRH--QALFEETYVCMTRKRRGLPR 184

Query: 178 NEQLLGELSFEKYMSMGHV----AAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIP 233
            +    ELS + ++   HV          AL   F        G  R + L +P F  +P
Sbjct: 185 TK----ELSLKAFLDASHVQITSVEHSHHALDDEFR-----AQGVGRHIALELPHFVALP 235

Query: 234 PLLPHTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREI 293
            +L  T+  A +P RL   F +    +I + P+        + W    ++D GN+W+R +
Sbjct: 236 SVLAVTDLFATLPRRLAHIFNRDGGFQIYELPVTLPIAAVTMHWHEHFDQDEGNVWLRNL 295

Query: 294 L 294
           +
Sbjct: 296 M 296