Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella sp. ANA-3

 Score =  118 bits (295), Expect = 2e-31
 Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 8/286 (2%)

Query: 10  MTALVCFEAAARNASFKKAAQEMNVTPAAISHQIKALEMDLKCSLFLRHHRGVELTEKGA 69
           + A+  FEAAAR+ SF +AA+E+ VT AA+SHQIKALE  L   LF R +R + LTE+G 
Sbjct: 8   LNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLTEEGQ 67

Query: 70  LLFVVIQRGFETISETLTQIRERPETVDVTIGATTAFSSLWLTPKISAFWKIHPSITV-- 127
             F+ I+  F  +++   ++  R     +T+  + +F+  WL P++S F + +P I V  
Sbjct: 68  SYFLDIKDIFTQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKNPDIDVRI 127

Query: 128 SQVVSDVPGMTSRCDLTIHYGNPQENGVEYRKLFQDHIIALGTTRFA-AEHRIARLEDLL 186
             V ++   +T   D+ I+YG     G+   KL  + +I + +         +++ EDL 
Sbjct: 128 KAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPLSKPEDLK 187

Query: 187 KAPLIHSSSNETGWTAWDDWFAVLGCPAPKGRSFYVNNYMIALQAAQDDVGAVLGWDGLV 246
              L+H  S    W AW     +      +G  F  ++  + LQAA    G  LG+  L 
Sbjct: 188 YHTLLHDMSRH-DWQAWFRQCGIHDINVNQGPIF--SHSSLVLQAAAHGQGVALGYSVLA 244

Query: 247 GSLVNEGRLVKLVQESIPSPVGFHL--RIHRRATAKARLFADWLVE 290
              +  GRLV   QE + S   ++L  + +     K   F +W+++
Sbjct: 245 RPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLD 290