Pairwise Alignments

Query, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., carbohydrate ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  176 bits (447), Expect = 4e-49
 Identities = 90/271 (33%), Positives = 148/271 (54%), Gaps = 4/271 (1%)

Query: 9   LSLYAGLAVVCGVLLFPIYWLFVTALST---LAEIRQLPPSFWPAEPQWSTFAKVGTERP 65
           ++LY  L ++  VLLFP YW+ +T++     L ++    P FW  +P      K+  E  
Sbjct: 39  VTLYLPLLIILVVLLFPFYWMALTSIKPDEQLIDMETYNP-FWVVKPTLKHIQKLLFETQ 97

Query: 66  IFLWLWNSTLAALGSVALSMVVSVFAGYSLSRFSVKGGRSLGLFILTAKMLPATLLVIPL 125
              WLWN+   A  S  LS+  SV A Y++ R   +G  ++G  I  A ++P ++L IPL
Sbjct: 98  YPRWLWNTMYVAAASTVLSIGASVLAAYAIVRLRFRGADTVGGAIFLAYLVPPSILFIPL 157

Query: 126 FGIFRSMGLIGSLWSLVLAHATLIIPFTTWMLKGYFDTIPRELEQAAMVDGCSPLGALFR 185
             + ++ GL  S  SL+L + TL+IPF+TW+L GYF TIP ELE+ A++DG S    L +
Sbjct: 158 ASVIQAYGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILVK 217

Query: 186 VVLPVATPGLAATALYAFVLSWADYAYARTFLTNAQGSWTANLGITTMKGEYVTDWNEIS 245
           +++P+A PGL +  ++ F L W ++ YA TFL +          +       +  W  + 
Sbjct: 218 IIIPLAVPGLISAFIFCFTLCWNEFIYALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLM 277

Query: 246 AAAVFIALPIILIYLFLERYLVGGLTAGAEK 276
           A A+  +LP++++Y F   + V  +T   ++
Sbjct: 278 AGALVGSLPLVILYAFFVEHYVSAMTGAVKE 308