Pairwise Alignments

Query, 441 a.a., transport protein from Sinorhizobium meliloti 1021

Subject, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (490), Expect = 1e-53
 Identities = 127/426 (29%), Positives = 208/426 (48%), Gaps = 8/426 (1%)

Query: 5   SSGKSLGLAACTAIVVGNMVGSGFYLSPAAVAPYGNLAIVIWIVMGAGAICLGLTFARLA 64
           S+ K +GL ACT +V GNM+GSG  L P+ +A  G+++I  W++   GA+ L   FARLA
Sbjct: 3   SNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLA 62

Query: 65  KLSPAVGGPYAYTRLAYGDFPGFLIAWGYWISIWASLPVIAVAFAGVVIDFFPFLRGRGT 124
             +P  GGP AY       F GF     Y+ + W     IA+     +  FFP L     
Sbjct: 63  TKNPQEGGPIAYAGEVSPVF-GFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIP 121

Query: 125 ATLLTLSVIWLVVLVNLRGVHAAGLFSEITTYAKMIPFGAVALLGLFYIDFSHFA-DFNP 183
           A L T++ +WL  LVNL G         I     +IP    AL G  + D + ++ ++N 
Sbjct: 122 AGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQNWNV 181

Query: 184 SGQPLLQASAALAPLTMFAYLGLESATVPAGDVRDAERTIPRSTVLGIAIAVTLYVLGTI 243
           S      A      + +++++G+ESA V +G V + +RT+P +T+LG  +A  +YVL T 
Sbjct: 182 SAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLSTQ 241

Query: 244 VVMGLVPREELVHSVAPFSEAARRMWGPAGELAISLAVVLSSIGALNGWTLLMGQVPMAA 303
           ++ G+ P  E+  S APF+ A   ++G      +S    L+   +L  W +L+G+    A
Sbjct: 242 MISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRA 301

Query: 304 ARDGLFPPLFSRLSARHVPATGIVVSATLATILVLVQAAGSEGFSSIYRLFVGLST---M 360
           A DG FP +F       VP  G+++++++ T+L+LV    S   +    LF  L+T   +
Sbjct: 302 ANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVL 361

Query: 361 TAVIPYAFCALASSLVSARVSGGTLIPRVTLIELVGFTFAIFTLYGCGAEPVLYGLVLLL 420
             ++PY + ++         +  T    V L   +   F +  L G     +    ++ L
Sbjct: 362 LTMLPYFYSSINLIRFEGMTTRNTF---VMLFSGIASLFCMVALAGAEGSTLTATFIMSL 418

Query: 421 LSIPVY 426
           + +  Y
Sbjct: 419 IILMFY 424